Gene detail

Gene detail information of Glyur000074s00005549

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT3G18040.1	0	MAP kinase 9
NR	XP_004503295.1	0	PREDICTED: mitogen-activated protein kinase 9-like isoform X2 [Cicer arietinum]
COG	YP_003112167.1	6.00E-26	serine/threonine protein kinase [Catenulispora acidiphila DSM 44928]
Swissprot	tr\|Q9LV37\|MPK9_ARATH	0	Mitogen-activated protein kinase 9
trEMBL	tr\|Q1SN03\|Q1SN03_MEDTR	0	Serine/threonine protein kinase, active site {ECO:0000313\|EMBL:ABE80150.1}

Sequence

Transcript Sequence

>Glyur000074s00005549.1
ATAGTATATAAGGTATAATAAGATCTTTGTCTGTCTAAGACAAAAGCTGCTGCAATACAATTTCTCTCTCCGATTCGATTCAATTCAATTCACCTCGACTCAACTCAGCTCAACATTCTGCCTCCATTCTCCGCATCATCGGGGGCAGCCATAGGAGAAAGAAGAAGAAAAAAAAAGGAGATAATAAAGTGGTTACTTACTACTGTATAATTTAGCATAACAGAAATAAAATAAAAAAATAAAGAGAGGAGGGGGAGTGGTGGATCGATTGATTGAGGTGGCGTGCAGAGTCAAAGAGTGAAGAAAGAGGGAAAGAGTGGGTGTGGGTGTGGGTGTGGGTGTATTATAACAAGAAGTGAAGAAGCAGATGCTAGATGGGTGGTGGAGGAACATTCGGTGAAGGGATTCGTCGCCTGTTTCAACGACGCGCTCCTCCTTCTTCTAAGGACAATGATGACCGCGTCTTCGTGAGAGATTTGCGCGCACAATTGGCCTCTATTCCCACTACTCAAACTCAACCCATTCAACATTATTCCCAATCTGATCATTTCTCTCTCTCTCCCTTGAAGCCCATCAGAGTCAGAGTCCCCACCCTCTTCCCACCTCCTTCTTCCTTCATGGATCCTCACAAAAAGGGTACACCTGAATCAGAGTTTTTTACTGAGTATGGAGAGGCAAGCCAATACCAGGTCCAAGAAGTCATTGGAAAAGGAAGTTATGGTGTTGTGTGTTCTGCAATTGACACACATACTGGTGAAAAGGTTGCAATCAAGAAAATCAATGATGTTTTNGAGCACGTATCGGATGCCACGCGGATCCTCAGAGAAATCAAGCTCTTGCGGTTGCTCCGGCATCCTGATGTTGTGGAAATTAAGCATATCATGCTTCCTCCTTCTCGGCGAGAGTTCAGGGATATCTATGTTGTGTTTGAGTTGATGGAATCTGACCTCCATCAAGTGATTAAGGCAAATGATGATCTTACTCCTGAGCACCACCAATTTTTCTTGTACCAACTTCTTCGGGGCCTCAAATATATACACACAGCAAATGTGTTTCATCGTGATTTGAAGCCAAAAAACATTCTTGCTAATGCTGATTGCAAACTAAAGATATGTGATTTTGGGCTTGCTCGAGTTTCATTTAATGAGGCTCCATCCGCTATATTCTGGACAGACTATGTTGCAACTCGGTGGTACCGTGCACCTGAACTATGTGGTTCTTTTTTCTCAAAATATACCCCTGCAATTGATGTTTGGAGCATTGGATGCATATTTGCAGAAATGCTCACTGGGAAGCCATTGTTTCCTGGGAAAAATGTGGTGCACCAGTTGGATCTCATGACTGATTTGCTTGGCACTCCTCCTCCTGAGTCCATTGCAAGGATTCGAAATGAGAAAGCTAGAAGGTATCTGAATAGCATGCGAAAAAAGCAACCTGTTCCACTCTCCCAGAAATTTCCAAGTGTAGATCCAATGGCTCTTCGTTTATTGGAGCGCTTACTTGCATTTGATCCTAAAGATCGTCCATCAGCTGAAGAGGCACTAGCTGATCCTTACTTCCATGGTTTGTCAAACATCGATCGCGAACCATCCACTCAACCCATTTCAAAACTTGAGTTTGAGTTCGAGAGAAGGAAATTGACCAAAGATGATGTTAGAGAGTTGATTTATCGAGAGATTTTGGAGTATCATCCCCAAATGCTCCAAGAATATCTTCGCGGTGGAGAACAAACCAGCTTCATGTATCCAAGTGGGGTTGATCGGTTCAAGCGGCAGTTTGCACATCTTGAGGAGCATTATAGCAAAGGTGAACGAAGCACTCCATTGCAGAGACAGCATGCCTCCTTACCTAGGGAGCGGGTTCATACTTCCAAGAATGAAAATAATGAAAACAANGATCCTGAAAGGGCAACTGGATCAAATCTTCAGAGCCCTCCAGGGTCTGATGTGACAGATGCTGGAAACCCAGGTGCTCAAAATGGACCCTCCAAGCCAAACTCCAGTACACNTAGCTTGTTGAAGAGTGCCAGCATTAGTGCTTCAAAGTGTATAGATGTCAAACAAAGTAAAAATCCAGAGGAGCCAATTGTGGAGGTCAATGACGAGGCAGTGGATGGATTGACGGAAAAAATTGCTTCTCTCCATGCTCAGTCCTAGATTGATTATAATTTTTATCTTGCTTCCATGCTCTGGTCCTTTCCACACAGAGCAAGAGCTGGTGGTTTGAAGGACTTCATAGAAACCCTCTCCATTGTTTGTGCTAGAAGCTAACTTAAGGACTCCTTTATCATGAACTGCACTTTTGTATTACTGCTGTAGGTTTTGTAATTAAGTATTTATTTGTGTACGGAAACGCAATGTATACTACTGATAATTTATTATGGAANAGGGATGAACAGTCCCATTCACAGTATTTTCTAATCATAATCATAATAACATTAACAAAAAGATGTTTTTCGCCTGCTAGCACTAGCGTGCACATTTTAGTGGGTGCATAGTGTGTGGTGGGAGACATGGAATGAGCTATTTGANATAGGACATCTTACGACAAGGTGAAGACATAATCCTGTAGTAGATTTTCAGACTTGAGTAGTTGCAATTGCAATTTTTGTGGGTAAAATACAAAACAGGGTTATCATGATGAATTCTCCTAATGCANTATTGGTAAAAGATGAAACATTTCNTATATTTGAAGGGGTGCANTGAGTANCACTGGCAGCCTAGGTCTGTTAGGAGTTGCCAAATAATTTATGAAGAGCATTTCTCTAGCTGTCTGATTATTCAGCTTGCTCTTCAATTAATTCTATGCATGTCATGCAATATTTTTAACTTCTCTGTGATTTGCATTCTCTGATATGATCCAAAGAGAGGTCGGAGTCAAACTTACCTCCTCTTGGTCACTGGTCAGTACGAAGTAGTCTCAGCATGGACACTAATTCCATTGGGCTTCTCAATGCTGTCAGCACTTCTTTGATCACATATAAATAGACCCAGAGAGCATTGATTTTTACCACATCTCTCATCTCTCTATTCTTACCAATAATCCCCACAGGAACAAATACCCTCGTTGAAGTGGTGAAAGCGGTGAGAATCCCTTAAGATTATCAACCTTCCAACAATCTTGGATATGTGCTTGATGGCATTATGACAGTCATGACAAACACGCAAGTTTTTCATGACACGTATTGGTCTGCCAGACGGTATGGTCAGAATTCCAAACGCTACAGCTAATTTTTCACTGTGATACTTGAGCATCCGCTCCTTCTCTTCCTCTTCCACATCATGCAAAACCAATTTTGTTGAAGGAACATACCCCTCGCGCCTCATTTTTAGATCAAGCTCTTCTAAGAATGCATATATTCTATCCTTTTCTGAATGGAAACAATCCCCAACTGTGAACGTATGAATCTTGTTTTGTACCTCAACCCAACTATACCCAGGTACTTTCTGTACACCCACATCCCTCATCCTCGATCTCATCTTACCAACATCAACCCATCTGCCCGAAGCTGCATATAGATTTGAAAGGAGGATATACATTCCCGAGTTATGAGGTTCCATCTTAAAAACCATCTCAGCAGCCTTCTCACCCAGTTCAGTATTGCCATGAATCCGGCTTGCACCGAGTAGAGCTCCCCATGAAGCAGCACCTGGCTCAAAAGGCATGTTTCTCATTAAGTCCTGTGCTTCTTCCAAGCGGCCAGCTCTGCCAAGAAGATCAATCATGCAAGTATAATGTTTTGAATTTGGTGTTACACCGTAATCTTTATTCATTGAATAGAAGTATTCAGTTCCCCTGTCTATCAAGCCAGTATGACTACAAGCAGACAGAACACCGACCTGAAACATGATTAGAGAAATAGTAAGCAGAATGTAATATTACATGNAGGAAAGGGTCAAAAGGCATGCTAC

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00074	207096	213820	+

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:4.5.1

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K20538	MPK8	EC:2.7.11.24	MAPK signaling pathway - plant	map04016

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function

GO:0004672 protein kinase activity

GO:0005524 ATP binding

GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000074s00005549.1	PF00069.20	Pkinase	104	395	2.20E-69

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	13.855
SRR1783600	control	13.875
SRR1783602	moderate drought stress	10.462
SRR1811619	moderate drought stress	10.375

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	24.807
DRR006520	Root Summer glycyrrhizin high producing strain	24.506
DRR006521	Root Winter glycyrrhizin high producing strain	10.147
DRR006522	Root Winter glycyrrhizin high producing strain	9.863
DRR006523	Root Summer glycyrrhizin low producing strain	42.157
DRR006524	Root Summer glycyrrhizin low producing strain	41.894
DRR006525	Leaf Summer glycyrrhizin high producing strain	10.773
DRR006526	Leaf Summer glycyrrhizin high producing strain	10.474

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	25.156
SRR2868004	Drought Stress (root)	25.493
SRR2967015	Control (root)	20.028

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	11.159
SRR9715740	Leaf	9.779
SRR9715741	Leaf	14.572
SRR9715739	Root	9.533
SRR9715742	Root	27.850
SRR9715743	Root	22.383

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	39.266
SRR8749028	MeJA induced 9h	27.776
SRR8749029	MeJA induced 9h	38.039
SRR8749030	Uninduced	63.247
SRR8749031	Uninduced	24.446
SRR8749032	Uninduced	24.869

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	16.842
SRR8400027	Control - Root	17.580