Gene detail information of Glyur000074s00005527 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G48580.1 | 8.00E-48 | |
| NR | XP_004503271.1 | 5.85E-172 | PREDICTED: uncharacterized protein LOC101495798 [Cicer arietinum] |
| trEMBL | tr|G7LE63|G7LE63_MEDTR | 5.00E-155 | Nuclear localized protein, putative {ECO:0000313|EMBL:AET05595.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00074 | 83848 | 86421 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000074s00005527.1 | PF15072.1 | DUF4539 | 118 | 204 | 7.60E-31 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.629 |
| SRR1783600 | control | 1.605 |
| SRR1783602 | moderate drought stress | 4.866 |
| SRR1811619 | moderate drought stress | 4.862 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.622 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.797 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 12.894 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 12.599 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.604 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.441 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.215 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.143 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.381 |
| SRR2868004 | Drought Stress (root) | 1.883 |
| SRR2967015 | Control (root) | 1.879 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.501 |
| SRR9715740 | Leaf | 0.839 |
| SRR9715741 | Leaf | 0.715 |
| SRR9715739 | Root | 0.720 |
| SRR9715742 | Root | 1.112 |
| SRR9715743 | Root | 0.758 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 10.087 |
| SRR8749028 | MeJA induced 9h | 5.920 |
| SRR8749029 | MeJA induced 9h | 5.975 |
| SRR8749030 | Uninduced | 1.533 |
| SRR8749031 | Uninduced | 1.774 |
| SRR8749032 | Uninduced | 1.454 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.561 |
| SRR8400027 | Control - Root | 2.174 |