Gene detail information of Glyur000074s00005519 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G17950.1 | 2.00E-33 | |
| NR | XP_007152679.1 | 3.51E-87 | hypothetical protein PHAVU_004G150000g [Phaseolus vulgaris] |
| Swissprot | tr|Q6DR24|Y3795_ARATH | 2.00E-44 | Uncharacterized protein At3g17950 |
| trEMBL | tr|V7C5Q8|V7C5Q8_PHAVU | 1.00E-87 | Uncharacterized protein {ECO:0000313|EMBL:ESW24673.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00074 | 36952 | 37705 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.207 |
| SRR1783600 | control | 6.245 |
| SRR1783602 | moderate drought stress | 14.548 |
| SRR1811619 | moderate drought stress | 15.226 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 11.488 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 11.560 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.550 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.298 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 13.119 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 13.028 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.669 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.910 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 14.345 |
| SRR2868004 | Drought Stress (root) | 11.969 |
| SRR2967015 | Control (root) | 14.271 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 8.741 |
| SRR9715740 | Leaf | 8.046 |
| SRR9715741 | Leaf | 6.147 |
| SRR9715739 | Root | 21.697 |
| SRR9715742 | Root | 8.256 |
| SRR9715743 | Root | 8.274 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 4.156 |
| SRR8749028 | MeJA induced 9h | 2.827 |
| SRR8749029 | MeJA induced 9h | 2.898 |
| SRR8749030 | Uninduced | 4.008 |
| SRR8749031 | Uninduced | 1.578 |
| SRR8749032 | Uninduced | 3.480 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 18.496 |
| SRR8400027 | Control - Root | 24.505 |