Gene detail information of Glyur000074s00005518 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G18290.1 | 3.00E-23 | |
| NR | XP_004503263.1 | 1.09E-87 | PREDICTED: uncharacterized protein LOC101493228 [Cicer arietinum] |
| trEMBL | tr|I1K5B3|I1K5B3_SOYBN | 2.00E-87 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA05G33760.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00074 | 34330 | 34854 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000074s00005518.1 | PF14009.1 | DUF4228 | 1 | 172 | 1.30E-33 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.034 |
| SRR1783600 | control | 4.135 |
| SRR1783602 | moderate drought stress | 9.848 |
| SRR1811619 | moderate drought stress | 9.730 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.808 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.898 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.184 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.911 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 18.178 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 18.917 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.177 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.175 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 20.790 |
| SRR2868004 | Drought Stress (root) | 10.812 |
| SRR2967015 | Control (root) | 8.231 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.186 |
| SRR9715740 | Leaf | 0.150 |
| SRR9715741 | Leaf | 0.125 |
| SRR9715739 | Root | 1.862 |
| SRR9715742 | Root | 2.434 |
| SRR9715743 | Root | 2.003 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.961 |
| SRR8749028 | MeJA induced 9h | 0.201 |
| SRR8749029 | MeJA induced 9h | 0.498 |
| SRR8749030 | Uninduced | 4.054 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.213 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 12.335 |
| SRR8400027 | Control - Root | 19.054 |