Gene detail information of Glyur000074s00005517 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G17930.1 | 6.00E-18 | |
| NR | XP_006579355.1 | 1.01E-81 | PREDICTED: uncharacterized protein LOC100306671 isoform X1 [Glycine max] |
| trEMBL | tr|C6T0E0|C6T0E0_SOYBN | 2.00E-80 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA05G33750.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00074 | 28808 | 30892 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000074s00005517.1 | PF11460.3 | DUF3007 | 103 | 199 | 6.20E-32 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 10.590 |
| SRR1783600 | control | 10.477 |
| SRR1783602 | moderate drought stress | 9.596 |
| SRR1811619 | moderate drought stress | 9.555 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 27.731 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 27.135 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 28.106 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 26.904 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 59.952 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 59.890 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 151.459 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 149.591 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 21.238 |
| SRR2868004 | Drought Stress (root) | 19.071 |
| SRR2967015 | Control (root) | 21.617 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 146.164 |
| SRR9715740 | Leaf | 202.798 |
| SRR9715741 | Leaf | 148.931 |
| SRR9715739 | Root | 4.772 |
| SRR9715742 | Root | 11.589 |
| SRR9715743 | Root | 10.162 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 48.521 |
| SRR8749028 | MeJA induced 9h | 38.042 |
| SRR8749029 | MeJA induced 9h | 58.339 |
| SRR8749030 | Uninduced | 72.993 |
| SRR8749031 | Uninduced | 22.414 |
| SRR8749032 | Uninduced | 29.968 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 18.992 |
| SRR8400027 | Control - Root | 22.116 |