Gene detail information of Glyur000073s00007828 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G74520.1 | 1.00E-66 | HVA22 homologue A |
| NR | XP_004508753.1 | 5.98E-108 | PREDICTED: HVA22-like protein a-like [Cicer arietinum] |
| Swissprot | tr|Q9S7V4|HA22A_ARATH | 2.00E-93 | HVA22-like protein a |
| trEMBL | tr|C6SYY3|C6SYY3_SOYBN | 1.00E-107 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA05G01160.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00073 | 380856 | 383219 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000073s00007828.1 | PF03134.14 | TB2_DP1_HVA22 | 19 | 106 | 2.60E-31 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 115.788 |
| SRR1783600 | control | 115.894 |
| SRR1783602 | moderate drought stress | 130.583 |
| SRR1811619 | moderate drought stress | 131.319 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 125.645 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 123.691 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 102.558 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 99.977 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 111.395 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 110.718 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 38.022 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 37.902 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 103.504 |
| SRR2868004 | Drought Stress (root) | 105.119 |
| SRR2967015 | Control (root) | 107.278 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 54.856 |
| SRR9715740 | Leaf | 55.112 |
| SRR9715741 | Leaf | 55.992 |
| SRR9715739 | Root | 62.098 |
| SRR9715742 | Root | 76.252 |
| SRR9715743 | Root | 77.338 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 141.553 |
| SRR8749028 | MeJA induced 9h | 79.489 |
| SRR8749029 | MeJA induced 9h | 94.135 |
| SRR8749030 | Uninduced | 19.893 |
| SRR8749031 | Uninduced | 8.792 |
| SRR8749032 | Uninduced | 13.101 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 160.350 |
| SRR8400027 | Control - Root | 172.773 |