Gene detail

Gene detail information of Glyur000073s00007805

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G36220.1	0	ferulic acid 5-hydroxylase 1
NR	XP_003547953.1	0	PREDICTED: cytochrome P450 84A1-like [Glycine max]
COG	YP_003385314.1	6.00E-40	cytochrome P450 [Spirosoma linguale DSM 74]
Swissprot	tr\|Q42600\|C84A1_ARATH	0	Cytochrome P450 84A1
trEMBL	tr\|K7MH28\|K7MH28_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA16G24341.1}

Sequence

Transcript Sequence

>Glyur000073s00007805.1
TCACTATTCTCATCTCTCAATGTTTTTTTATCAAACAACGTTTTATTAATCAGTTTTTCTTCTAACCAAGAAAACAACATTCAATTAACAAGGTCCACTTGTATATTATATATCCATATATTTATTTGTTAAACCACAAGGTCTAATTACACTCCACAAGCAACGTGATTATATAAGGCCCATAACATCTCTCCCACCTTAGCAGCCCTTAGAGTTGCAATCTCACATCAAGTACTTCAACACTCAACTCAACACCCCCCCCACACATATTCATTCCATTCCCAACAAGCTAAGTAAGATTCAATTCCACAACATGGATTTGCTTCTGCAAGCAAAAACCAAAGTACTGGAACCATTAATAATCAGTAGTACAAGTACCACAACACTCTTGTTGGTGATCATTATCATCCCACTGATCACGTTGTTGCTACCATGTTTAGTGTCACGAATAATTGGAAGAATAAATAGGAGACGACCATACCCACCAGGACCAAAAGGCCTTCCCTTGATAGGCAACATGAAAATGATGGACAAGCTAACACACAGAGGCTTAGCAAACTTGGCAAAACAATACGGCGGCGTTTTCCACCTCCGCATGGGGTGGGTCCACATGGTTGCAATTTCCAACGCGGAAGCAGCGCGTCAAGTGCTCCAAACACACGACAACATCTTCTCCAACAGACCCGCAACCGTCGCCATAAGTTACCTAACCTACGACCGTGCTGACATGGCGTTCGCACACTACGGTCCCTTCTGGCGCCAGATGCGCAAGCTATGCGTCGTTAAGCTTTTTAGCCGCAAGCGCGCCGAGAGTTGGAACTCCGTTAGAGACGAGGTTGACGCCGTCGTGAACGCCGTTAGTGACAACATCGGCACGCCCGTGAACGTTGGGGAGTTGGTGTTTAACCTGACAAAGAACATCATCTATCGTGCTGCTTTTGGGTCTAGCTCGGATCAGGAAGGGAAACAAGACGAGTTCATTTCGATACTGCAGGAGTTTTCGAAGCTGTTTGGTGCGTTTAATGTTGCGGACTTTGTTCCGTGTCCTGGGTGGTTCGACCCGATGGGTCTCAAGGNCCGGCTCGTGAAGGCTCGTGGGGCATTGGACCGGTTTATTGACAAGATTATTGATGAACACGTGGAGAAGAAGAGGAGGAGGAGCACGGGNGCTTGTGGTGAAGAGAGTGATATGGTTGATGAGTTGTTGGCTTTCTACAGCGAGGAGGAGGAGGCTATTAAGGTGCATAGTAGTGAATCGGACGATCTGCACAACTCAATCAAACTCACCAGGGATAACATCAAAGCCATCATCATGGATGTGATGTTCGGNGGGACGGAGACGGTGGCGTCAGCAATAGAGTGGGCGATGGCGGAGCTTATGAGAAGCCCAGACGACCTAAAGCGCGTGCAACAAGAACTCGCCACCGTGGTTGGCCTTGACCGCCGCGTCGAGGAGCAAGACATCGAGAAGCTCACCTACCTCAAATGCGCCATCAAGGAGACGCTCCGCCTCCACCCGCCGATCCCCCTGCTCCTCCACGAGACGGCGGAGGACGCGGCGGTTTCCGGCTACTTCATCCCGAAGGGCTCGCGCGTGATGATCAACGCGTGGGCCATCAACAGGGACGGGGACTCGTGGGAGGAACCCGAGGCGTTCAAGCCTTCGCGGTTTCTCGACCCGGGNGCGCCTGATTTCAAGGGGAGCAACTTCGAGTTCATTCCATTCGGGTCGGGTCGGAGGTCATGCCCCGGGATGCAGTTGGGCCTGTACTCTTTGGACCTGGCCCTGGCCCACTTGCTTCACTGCTTCACGTGGGAGTTACCGGACGGGATGAAGCCCAGCGAGATGGACACGAGTGACGTGTTCGGACTCACCGCTCCCAGGGCGACTCGACTCGTCGCTGTTCCCTCTAAGCGTCTCTTGTGCCCTCTCTGAAGAGCTTTGGGACTTTTACTTCTTATTATCATCACTATTTGTTTTTTTGCTTTAATGTTTTTTATCCCTCAAATTATACATAGATGTTTGAGTAGAAGTAGAGCACAATAAATGGAGTTGTAAAAAAAAATAAAAAACACAATAAATGGATGAGAGGCAGAAAGAAAGAAAAGGAACAACATTGAATGTGGGAGGATTAGGTAACCTTTCTCTGTTTGATAATATGTCATGTGTGCCAAGGCATTTACGTCGTTGTTGTCATTAGTGGTTGTGTTTTCGGCTTTGTACACACTGCTGGTTTTGATTTATTTTTTTTTTATGGAAAAAAAAAACAAACTTAAACTGCAATTAAAGTGTAAAGGAGGCGGTTGGGGACACATTAATATTGACGTGTGGAATTGTGTGATTGCGATTATTTAGTTTTATTTTTATGTTTTTAGTTAGAGGATTGTTTTGTAT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00073	241826	245418	-

Gene family

Gene family	subfamily
Cytochrome P450 Family	CYP84A1

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K09755	CYP84A, F5H	EC:1.14.-.-	Phenylpropanoid biosynthesis	map00940

Gene Ontology

biological_process
GO:0055114 oxidation-reduction process

molecular_function

GO:0005506 iron ion binding

GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

GO:0020037 heme binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000073s00007805.1	PF00067.17	p450	57	524	3.50E-103

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	7.951
SRR1783600	control	8.049
SRR1783602	moderate drought stress	9.089
SRR1811619	moderate drought stress	9.096

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	8.562
DRR006520	Root Summer glycyrrhizin high producing strain	8.539
DRR006521	Root Winter glycyrrhizin high producing strain	0.884
DRR006522	Root Winter glycyrrhizin high producing strain	0.952
DRR006523	Root Summer glycyrrhizin low producing strain	23.272
DRR006524	Root Summer glycyrrhizin low producing strain	23.170
DRR006525	Leaf Summer glycyrrhizin high producing strain	2.319
DRR006526	Leaf Summer glycyrrhizin high producing strain	2.198

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	108.176
SRR2868004	Drought Stress (root)	367.705
SRR2967015	Control (root)	239.464

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	9.561
SRR9715740	Leaf	25.333
SRR9715741	Leaf	21.296
SRR9715739	Root	19.108
SRR9715742	Root	41.508
SRR9715743	Root	36.786

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	8.458
SRR8749028	MeJA induced 9h	8.486
SRR8749029	MeJA induced 9h	1.878
SRR8749030	Uninduced	125.228
SRR8749031	Uninduced	49.156
SRR8749032	Uninduced	37.980

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	39.925
SRR8400027	Control - Root	28.825