Gene detail

Gene detail information of Glyur000073s00007802

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT3G51140.1	1.00E-85	Protein of unknown function (DUF3353)
NR	XP_004509336.1	5.59E-174	PREDICTED: uncharacterized protein LOC101513973 [Cicer arietinum]
COG	YP_007157832.1	3.00E-18	heat shock protein DnaJ domain protein [Anabaena cylindrica PCC 7122]
trEMBL	tr\|I3T709\|I3T709_LOTJA	2.00E-170	Uncharacterized protein {ECO:0000313\|EMBL:AFK48301.1}

Sequence

Transcript Sequence

>Glyur000073s00007802.1
ATCGACNGAGTTAAGTTTATTGGGTGGAGCAGGGTTTTGTTGTCCGCCTAAGCCCTTACACGCTCGGCAATCTCGCTATCCGTTGCAGTTCACTTCACAGTTCACTCCTCTCTCTCAATTGTCAAAAATGATTGAACCTAACACCCTCTGAATCTGAACACTTTCTTCCCCTTTTCTTCTCCAACGCCAACAAGCATCAGTTTGTGATCTCAATTCTCACAACGCATAAACAGACAGGGTCCTGAAGATTTTAGTAACAATGACTGTATCTGGGTTGATTGGTAGTCTCTCAAGATGCCCCCTTTTACCTCCTGGCATCCTGGGATCACGCCATGCCCGTGTTAAGGCNTTTTCTGCCGCTGGTAAGCCTAAACAAGGGACAGAGTTTCTCCAAGCGGAAAGAACAAGTTTTTCATCTCCTAGCTTGAAATGCAATGGACGACAAGTTCAATTGGTCAGAAGNGCCATGGATGCTTCATATGGTGATATGTCAAATGATTCTGCTGCTGTTTTTCCAAGAATTAGTGTGAAGGACCCATATAAACGACTTGGAATAAGCAAGGAAGCATCTGAAGAAGAAATTCAAGCAGCAAGGAACTTCCTGATTCAAAAATATGCAGGGCACAAGCCAAGTGTAGATTCAATTGAGTCGGCACATGACAAAATAATCATGCAGAAGTTCTATGAGCGTAGAAACCCAAAAATTGACTTTAAGAAAAAAATGAGGGAAGTCAATCAATCCCGATTTGTTCAGGCTGTCAGAGAGAGATTTCGTACTCCATCCACGAAATTCATAATAAAAACATCGCTGGCATTTTTATTGCTTGGAGTTCTGACTGTTCTCTTTCCAACTGAGGAAGGGCCAACACTTCAGGTAGCAATATCTCTGATCGCTACAATTTATTTTGTACACGATCGGCTGAAGAGCAAGCTACGAGCTTTCCTTTACGGGGCTGGAGCATTTGTTTTTTCGTGGCTGTTGGGAACCTTCTTGATGGTGTCAGTAATTCCTCCTATTCCTATAATTAAGGGACCAAGGGCATTTGAGGTGATCACATCATTGATAACATATGTTCTCTTATGGGTTTCATCAACCTATCTT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00073	223557	226570	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

Not hits found.

Not hits found.

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000073s00007802.1	PF11833.3	DUF3353	100	281	7.40E-49

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	26.554
SRR1783600	control	26.317
SRR1783602	moderate drought stress	15.480
SRR1811619	moderate drought stress	15.288

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	33.236
DRR006520	Root Summer glycyrrhizin high producing strain	32.800
DRR006521	Root Winter glycyrrhizin high producing strain	5.874
DRR006522	Root Winter glycyrrhizin high producing strain	5.783
DRR006523	Root Summer glycyrrhizin low producing strain	29.846
DRR006524	Root Summer glycyrrhizin low producing strain	29.399
DRR006525	Leaf Summer glycyrrhizin high producing strain	31.064
DRR006526	Leaf Summer glycyrrhizin high producing strain	30.841

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	20.644
SRR2868004	Drought Stress (root)	14.737
SRR2967015	Control (root)	13.937

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	29.442
SRR9715740	Leaf	49.429
SRR9715741	Leaf	27.321
SRR9715739	Root	8.445
SRR9715742	Root	21.215
SRR9715743	Root	18.212

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	25.930
SRR8749028	MeJA induced 9h	12.550
SRR8749029	MeJA induced 9h	13.412
SRR8749030	Uninduced	6.416
SRR8749031	Uninduced	4.883
SRR8749032	Uninduced	3.518

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	32.825
SRR8400027	Control - Root	28.580