Gene detail information of Glyur000073s00007783 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_002618303.1 | 8.76E-29 | 60S ribosomal protein L2 [Clavispora lusitaniae ATCC 42720] |
| trEMBL | tr|I3S9N7|I3S9N7_MEDTR | 4.00E-27 | Uncharacterized protein {ECO:0000313|EMBL:AFK36979.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00073 | 134395 | 136105 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 276.105 |
| SRR1783600 | control | 282.714 |
| SRR1783602 | moderate drought stress | 387.976 |
| SRR1811619 | moderate drought stress | 389.356 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 205.639 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 198.682 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 158.281 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 152.983 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 233.384 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 241.079 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 61.791 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 61.971 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 30.105 |
| SRR2868004 | Drought Stress (root) | 0.028 |
| SRR2967015 | Control (root) | 55.700 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.676 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 17.406 |
| SRR9715739 | Root | 28.921 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.241 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 34.587 |
| SRR8749028 | MeJA induced 9h | 26.706 |
| SRR8749029 | MeJA induced 9h | 28.058 |
| SRR8749030 | Uninduced | 16.546 |
| SRR8749031 | Uninduced | 5.047 |
| SRR8749032 | Uninduced | 44.957 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.012 |
| SRR8400027 | Control - Root | 0.022 |