Gene detail information of Glyur000073s00007782 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G34760.1 | 6.00E-41 | SAUR-like auxin-responsive protein family |
| NR | KHN34296.1 | 7.17E-69 | Indole-3-acetic acid-induced protein ARG7 [Glycine soja] |
| Swissprot | tr|P33081|AX15A_SOYBN | 6.00E-22 | Auxin-induced protein 15A |
| trEMBL | tr|I1MN71|I1MN71_SOYBN | 3.00E-69 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA16G24110.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00073 | 130101 | 130421 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000073s00007782.1 | PF02519.9 | Auxin_inducible | 15 | 105 | 5.30E-31 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 14.066 |
| SRR1783600 | control | 14.040 |
| SRR1783602 | moderate drought stress | 11.324 |
| SRR1811619 | moderate drought stress | 10.902 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.338 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.335 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.669 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.689 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.847 |
| SRR2868004 | Drought Stress (root) | 0.801 |
| SRR2967015 | Control (root) | 1.461 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.029 |
| SRR9715740 | Leaf | 0.088 |
| SRR9715741 | Leaf | 0.407 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 2.103 |
| SRR9715743 | Root | 1.372 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.428 |
| SRR8749028 | MeJA induced 9h | 0.967 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 8.716 |
| SRR8400027 | Control - Root | 16.976 |