Gene detail information of Glyur000073s00007777 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G17990.1 | 8.00E-103 | |
| NR | AFK49448.1 | 0 | unknown [Lotus japonicus] |
| trEMBL | tr|I3TAA6|I3TAA6_LOTJA | 0 | Uncharacterized protein {ECO:0000313|EMBL:AFK49448.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00073 | 99137 | 102972 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 21.930 |
| SRR1783600 | control | 22.021 |
| SRR1783602 | moderate drought stress | 26.452 |
| SRR1811619 | moderate drought stress | 26.064 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 41.629 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 40.617 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 45.179 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 44.454 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 61.719 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 61.883 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 15.788 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 15.876 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 72.729 |
| SRR2868004 | Drought Stress (root) | 78.067 |
| SRR2967015 | Control (root) | 72.847 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 35.006 |
| SRR9715740 | Leaf | 35.872 |
| SRR9715741 | Leaf | 41.461 |
| SRR9715739 | Root | 7.199 |
| SRR9715742 | Root | 27.452 |
| SRR9715743 | Root | 24.485 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 42.552 |
| SRR8749028 | MeJA induced 9h | 37.696 |
| SRR8749029 | MeJA induced 9h | 38.641 |
| SRR8749030 | Uninduced | 33.520 |
| SRR8749031 | Uninduced | 35.413 |
| SRR8749032 | Uninduced | 45.847 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 82.420 |
| SRR8400027 | Control - Root | 76.637 |