Gene detail information of Glyur000073s00007773 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G17972.1 | 9.00E-29 | |
| NR | XP_003629330.1 | 2.23E-73 | hypothetical protein MTR_8g075960 [Medicago truncatula] |
| trEMBL | tr|G7LC56|G7LC56_MEDTR | 8.00E-74 | Transmembrane protein, putative {ECO:0000313|EMBL:AET03806.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00073 | 85523 | 86080 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.103 |
| SRR1783600 | control | 1.119 |
| SRR1783602 | moderate drought stress | 1.320 |
| SRR1811619 | moderate drought stress | 1.361 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.318 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.385 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.200 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.195 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.792 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.787 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 141.589 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 140.219 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.563 |
| SRR2868004 | Drought Stress (root) | 3.900 |
| SRR2967015 | Control (root) | 2.179 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 44.514 |
| SRR9715740 | Leaf | 75.347 |
| SRR9715741 | Leaf | 48.158 |
| SRR9715739 | Root | 0.985 |
| SRR9715742 | Root | 1.138 |
| SRR9715743 | Root | 0.536 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.662 |
| SRR8749028 | MeJA induced 9h | 1.279 |
| SRR8749029 | MeJA induced 9h | 2.614 |
| SRR8749030 | Uninduced | 0.474 |
| SRR8749031 | Uninduced | 0.280 |
| SRR8749032 | Uninduced | 1.142 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.275 |
| SRR8400027 | Control - Root | 1.417 |