Gene detail information of Glyur000073s00007772 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G66230.1 | 1.00E-54 | Chalcone-flavanone isomerase family protein |
| NR | AFK46137.1 | 3.58E-135 | unknown [Lotus japonicus] |
| trEMBL | tr|I3T0U5|I3T0U5_LOTJA | 1.00E-135 | Uncharacterized protein {ECO:0000313|EMBL:AFK46137.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00073 | 81950 | 83627 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 14.991 |
| SRR1783600 | control | 15.070 |
| SRR1783602 | moderate drought stress | 6.682 |
| SRR1811619 | moderate drought stress | 6.816 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 21.541 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 21.003 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.924 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.169 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.726 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.647 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 83.053 |
| SRR2868004 | Drought Stress (root) | 35.108 |
| SRR2967015 | Control (root) | 43.556 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 10.327 |
| SRR9715740 | Leaf | 0.360 |
| SRR9715741 | Leaf | 2.497 |
| SRR9715739 | Root | 9.816 |
| SRR9715742 | Root | 8.204 |
| SRR9715743 | Root | 8.150 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 75.425 |
| SRR8749028 | MeJA induced 9h | 43.709 |
| SRR8749029 | MeJA induced 9h | 40.202 |
| SRR8749030 | Uninduced | 0.563 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 1.540 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 41.095 |
| SRR8400027 | Control - Root | 31.913 |