Gene detail information of Glyur000073s00007768 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G17880.1 | 4.00E-29 | Chaperone DnaJ-domain superfamily protein |
| NR | XP_004509362.1 | 3.31E-66 | PREDICTED: chaperone protein dnaJ 11, chloroplastic-like [Cicer arietinum] |
| COG | YP_004167739.1 | 1.00E-14 | heat shock protein dnaj domain-containing protein [Nitratifractor salsuginis DSM 16511] |
| Swissprot | tr|Q9FYB5|DNJ11_ARATH | 2.00E-35 | Chaperone protein dnaJ 11, chloroplastic (Precursor) |
| trEMBL | tr|G7LC41|G7LC41_MEDTR | 4.00E-61 | Chaperone DnaJ domain protein {ECO:0000313|EMBL:AET03791.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00073 | 52689 | 53177 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000073s00007768.1 | PF00226.26 | DnaJ | 67 | 130 | 2.80E-19 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.930 |
| SRR1783600 | control | 4.595 |
| SRR1783602 | moderate drought stress | 7.980 |
| SRR1811619 | moderate drought stress | 7.822 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 26.669 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 25.928 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 14.800 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 14.752 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 23.958 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 25.029 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 24.650 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 24.676 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 24.950 |
| SRR2868004 | Drought Stress (root) | 92.591 |
| SRR2967015 | Control (root) | 142.940 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 102.622 |
| SRR9715740 | Leaf | 49.056 |
| SRR9715741 | Leaf | 178.254 |
| SRR9715739 | Root | 2.913 |
| SRR9715742 | Root | 10.015 |
| SRR9715743 | Root | 9.845 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 45.993 |
| SRR8749028 | MeJA induced 9h | 51.908 |
| SRR8749029 | MeJA induced 9h | 19.656 |
| SRR8749030 | Uninduced | 22.196 |
| SRR8749031 | Uninduced | 23.725 |
| SRR8749032 | Uninduced | 158.608 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 12.387 |
| SRR8400027 | Control - Root | 9.874 |