Gene detail

Gene detail information of Glyur000073s00007764.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G66190.1	1.00E-169	ferredoxin-NADP(+)-oxidoreductase 1
NR	KHN01599.1	0	Ferredoxin--NADP reductase, leaf isozyme, chloroplastic [Glycine soja]
COG	YP_007102662.1	4.00E-133	ferredoxin--NADP(+) reductase [Pseudanabaena sp. PCC 7367]
Swissprot	tr\|P10933\|FENR1_PEA	0	Ferredoxin--NADP reductase, leaf isozyme, chloroplastic (Precursor)
trEMBL	tr\|I1JCG8\|I1JCG8_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA02G05350.1}

Sequence

Transcript Sequence

>Glyur000073s00007764.1
CATAGGTACCACTACTACGTACACTTATCCTGATGTAATATCTGCCACCCCATTTGGCTTCCAAATTTCGTCCACTCAATCTTATAATCCTCCGTCCAACCAAACCAAAAATCTTCCTACTTCACTGCCTACCACGTATAACGTATCATCATTGCTTCATTTAACATTTCCTCTCTCTCTCTCTCTCTCTCCTTCCTAATTTTCCCAAATGGCCGCTGCAGTAACTGCTGCAGTTTCCTTTCCATCCACCAAGTCCACCTCTCTCCCAAGCAGGACCTTCATCGTTGCCCCAGACAGAGTAGCATTCAACAAGAAGGTTCCATTGCAATACAGAGATGTTTGCAGCAGTGGAAGGTTAGTTTCCATCAGAGCTCAAGTCACCACTGAGGCACCAGCTAAGGTTGAAAAGGAATCCAAGAAACAGGAGGAAGGTCTGGTTGTGAACAAGTTCAAACCCAAGAACCCATATGTTGGTAGATGCCTGCTCAACACAAAGATCACTGGGGATGATGCTCCAGGAGAAACCTGGCACATGGTCTTCAGCACTGAGGGAGAGATTCCTTACAGAGAAGGACAATCAATTGGGGTAATTCCAGATGGTATTGACAAGAACGGCAAACCTCACAAACTCAGATTGTATTCCATTGCCAGCAGTGCCATTGGTGACTTTGGAGACTCCAAGACTGTTTCTCTATGTGTGAAACGGCTAGTGTACACAAATGAAAATGGAGAACTTGTTAAGGGGGTCTGCTCAAATTTCTTGTGTGACTTGAAGCCAGGAGCTGAAGTAACAATGACTGGACCTATTGGGAAAGAAATGCTTATGCCAAAAGATCCTAATGCCACCATCATCATGTTGGCAACTGGAACTGGGATTGCCCCATTTCGCTCATTTTTATGGAAAATGTTCTTCGAAAAGCATGATGATTACAAGTTCAATGGTTTGGCATGGCTCTTCTTGGGTGTCCCCACAGGCAGCTCACTGCTTTATAAGGAGGAATTTGAGAAGATGAAGGAGAAAGCACCTGAAAACTTCAGGCTTGATTTTGCTGTAAGCAGAGAGCAAACAAATGAAAAGGGAGAGAAGATGTACATCCAAACCCGCATGGCTCAATATGCAGAAGAGCTGTGGGAATTGCTGAAGAAAGATAACACTTACGTGTATATGTGTGGACTGAAAGGGATGGAAAAGGGAATTGATGACATAATGGTGTCATTGGCTGCCAGAGACGGCATTGATTGGACTGAGTACAAGAGGCAGTTGAAGAAAGCAGAGCAATGGAATGTCGAAGTCTATTAATTTCTGTTTGAATGCACATATATTTAGTCCTATTTTTATGCAGCAGCAAAATCTGTCACCCTCCTCCTGCATTCTGTAGATATAATATGGCGACCATGTAATTTTTCTTGGATGATTCTTACACTGTTGTTCATGAACAACTTCATTGCGACCCTGATGAGAAGTAATCTTTTTTGAGGGACGATGCAATATAGAATCCAACTTCATTGTACCAATTTTCAAATTTCATCTTTTACTGAGATATAGTTAACTTATAGTTTAAAAGGTTAAAGTTCCTTGATCAATTACAACGGGGGGAGGTTCAAACATAACTAGCTAGCCATGACAGCATTGTTTTT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00073	26394	29957	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K02641	petH	EC:1.18.1.2	Photosynthesis	map00195

Gene Ontology

biological_process
GO:0055114 oxidation-reduction process

molecular_function
GO:0016491 oxidoreductase activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000073s00007764.1	PF00970.19	FAD_binding_6	139	202	0.00012
Glyur000073s00007764.1	PF00175.16	NAD_binding_1	216	331	5.00E-27

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	4.684
SRR1783600	control	4.692
SRR1783602	moderate drought stress	5.189
SRR1811619	moderate drought stress	5.180

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	14.028
DRR006520	Root Summer glycyrrhizin high producing strain	13.672
DRR006521	Root Winter glycyrrhizin high producing strain	20.048
DRR006522	Root Winter glycyrrhizin high producing strain	19.417
DRR006523	Root Summer glycyrrhizin low producing strain	21.807
DRR006524	Root Summer glycyrrhizin low producing strain	21.899
DRR006525	Leaf Summer glycyrrhizin high producing strain	2030.745
DRR006526	Leaf Summer glycyrrhizin high producing strain	2021.541

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	24.649
SRR2868004	Drought Stress (root)	28.898
SRR2967015	Control (root)	15.507

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	1273.780
SRR9715740	Leaf	1755.100
SRR9715741	Leaf	1253.890
SRR9715739	Root	8.111
SRR9715742	Root	11.609
SRR9715743	Root	10.335

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	11.678
SRR8749028	MeJA induced 9h	11.383
SRR8749029	MeJA induced 9h	10.494
SRR8749030	Uninduced	5.316
SRR8749031	Uninduced	2.182
SRR8749032	Uninduced	11.422

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	25.520
SRR8400027	Control - Root	25.830