Gene detail information of Glyur000072s00008151 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G53708.1 | 8.00E-11 | ROTUNDIFOLIA like 9 |
| NR | XP_007135351.1 | 1.99E-17 | hypothetical protein PHAVU_010G121900g [Phaseolus vulgaris] |
| trEMBL | tr|V7APV0|V7APV0_PHAVU | 7.00E-18 | Uncharacterized protein {ECO:0000313|EMBL:ESW07345.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00072 | 300030 | 300542 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000072s00008151.1 | PF08137.7 | DVL | 29 | 47 | 1.40E-11 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.356 |
| SRR1783600 | control | 0.132 |
| SRR1783602 | moderate drought stress | 0.226 |
| SRR1811619 | moderate drought stress | 0.652 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.351 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.353 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.380 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.266 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.902 |
| SRR2868004 | Drought Stress (root) | 2.828 |
| SRR2967015 | Control (root) | 3.710 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 0.692 |
| SRR9715742 | Root | 0.647 |
| SRR9715743 | Root | 0.070 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 44.735 |
| SRR8749028 | MeJA induced 9h | 6.709 |
| SRR8749029 | MeJA induced 9h | 6.219 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.793 |
| SRR8400027 | Control - Root | 1.482 |