Gene detail information of Glyur000072s00008136 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G54130.2 | 2.00E-170 | Calcium-binding endonuclease/exonuclease/phosphatase family |
| NR | XP_004510611.1 | 0 | PREDICTED: uncharacterized calcium-binding protein At1g02270-like [Cicer arietinum] |
| Swissprot | tr|O81916|YC22_ARATH | 0 | Uncharacterized calcium-binding protein At1g02270 |
| trEMBL | tr|K7MEN0|K7MEN0_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA16G01890.3} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00072 | 237758 | 241896 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000072s00008136.1 | PF03372.18 | Exo_endo_phos | 60 | 308 | 1.90E-11 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 11.699 |
| SRR1783600 | control | 11.948 |
| SRR1783602 | moderate drought stress | 5.338 |
| SRR1811619 | moderate drought stress | 5.263 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 77.502 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 76.736 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 10.714 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 10.332 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 131.687 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 131.594 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 21.217 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 21.428 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 15.847 |
| SRR2868004 | Drought Stress (root) | 11.802 |
| SRR2967015 | Control (root) | 14.532 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 145.768 |
| SRR9715740 | Leaf | 78.155 |
| SRR9715741 | Leaf | 151.891 |
| SRR9715739 | Root | 159.248 |
| SRR9715742 | Root | 346.193 |
| SRR9715743 | Root | 320.026 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 51.246 |
| SRR8749028 | MeJA induced 9h | 80.293 |
| SRR8749029 | MeJA induced 9h | 38.644 |
| SRR8749030 | Uninduced | 23.041 |
| SRR8749031 | Uninduced | 4.581 |
| SRR8749032 | Uninduced | 9.110 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 15.164 |
| SRR8400027 | Control - Root | 36.755 |