Gene detail

Gene detail information of Glyur000072s00008131.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G35580.3	1.00E-31	NAC transcription factor-like 9
NR	XP_003637334.1	4.79E-62	NAC domain protein [Medicago truncatula]
Swissprot	tr\|Q9FFI5\|NAC86_ARATH	2.00E-28	NAC domain-containing protein 86 {ECO:0000312\|EMBL:AED92405.1}
trEMBL	tr\|G7ZZI3\|G7ZZI3_MEDTR	2.00E-62	NAC transcription factor-like protein {ECO:0000313\|EMBL:KEH18539.1}

Sequence

Transcript Sequence

>Glyur000072s00008131.1
CATGAAGTTAACTTCTTGGCGAAGCCTTTGGATTCAAATCACCATTGAAGTGAAGTGATCAGTCACACAGTCACTACTCAAGGCCTTCTTCTTTCGCTTCTTCTTCTTCTTCTTCTTCTTCTTCCACTTTCAAAATCCTTCTCTTCTTTTGTACATGCGGAAACAGCTATACACTTCAACAAGGCAATGGGGGAAGCAGCGCCTGTGGGATTCAGATTCCGTCCAACAGATGAAGAGCTTGTGGGTCACTACTTGAAGCACAAGTTGCTTGGTAATGATTCCATGGTTCACNACATTATAGCTGAGGTTGATGTTTGCATGTTTGAACCTTGGGACTTACCAGCATTTTCCAAGGTAAAATCCGATGACCCAGAATGGTTTTTCATCAGTCATCATTGTTTGAAGTTCACAAATAGCAAAAGGTGTAGCAGAAAGACTAAGGCTGGTTACTGGAAGATCACTGGTAAAGAGCGTAAAATTAGGGCCAGAGGCACCGACGATGTCATTGGCACCAAAAAGACTCTTAGAAGTTTTGTCTTGTGTCGCTTAATGGAGAAAGCTGAGAAAAAAGCCAGAGGGGTAACTNATGCATTGATACATGATGAACGGGAGCCAAGTAGCCATGTAGATGTAGTTGATGATAATGAAAACCAATCAACAGCTGATAGAACTCCAGAAGTATATGCTTCCCCAGAAGTGAATCTGGAACCAATCTTTACAGCAAAACCTCAGGAAGAGGAACATGGCTTCTCCTCACTACAGCTGCCTCCAATTGCCATTGATCATGCACCATATTTCCCAGGTTCCACATTCCCAGATGCCTATTNTGGGAACAAATACAGCATTATGGTGGAGTTTCCATTTGTATCTTCTTATGAGGAAGAAGACAATGTTGATTTTTCATTCTCGAATTCAATTTTAGCAGACGAGGACATTTTTATTAGTGAAAAAGCAAGTCAAACACCTACTGCTTTTATTAATGATTCCACTGCCTCACAGTCTTTGAGAGTGGCGCTTCCAACCATCCATAGTAGTGCATTCAACAAGAATGAAGAAACACCTTCAGGACATTCTTGGAGAATTGAGGAAAGAGATTCAACTGCCATTTTCTTTATGAGGCCATTTCAAGCAAGAATTATGTCTGCTGCTTCACCATTTGATCTAAGCGTTAATGTTGTATCATTGCAGGCATGGCTTCGTTATGAGAAAGCTGGGGAACAATTGGATGTCCAAGAGTTATCATCCCATGAAAGTGCTAAGTTATCTTTTCAACCATTGCCAAATGTTCCTAATGCTGAAAGGACTAGTGCCACTGAGCAAGACAAGACTGAAGAACCTAGAAGCACTGAAATAGTGAAATTCCTATGGGACCATATTATCCTTGTGACTCAGGCAATACACCTCATGGAAGAGTTGTTGCCAACCCTTTGAAATTCTGAGGCATGATGATAGATAATTCTAAGGTGAGCAGACATAGTTGAAGATTTTTCTTATTTTAGCCAATGCTAAATAATTGACCTATCATGCAGACCCTCTATATTTNGATCTGAAGTACTATGAACTCTCACCGTGAT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00072	216985	222548	-

Gene family

Gene family	subfamily
Transcription Factors Family	NAC

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006355 regulation of transcription, DNA-templated

molecular_function
GO:0003677 DNA binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000072s00008131.1	PF02365.10	NAM	6	116	3.10E-30

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	1.325
SRR1783600	control	1.315
SRR1783602	moderate drought stress	2.796
SRR1811619	moderate drought stress	2.890

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	1.856
DRR006520	Root Summer glycyrrhizin high producing strain	2.041
DRR006521	Root Winter glycyrrhizin high producing strain	3.141
DRR006522	Root Winter glycyrrhizin high producing strain	2.937
DRR006523	Root Summer glycyrrhizin low producing strain	2.722
DRR006524	Root Summer glycyrrhizin low producing strain	2.419
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.801
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.800

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	0.707
SRR2868004	Drought Stress (root)	1.208
SRR2967015	Control (root)	1.067

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	0.683
SRR9715740	Leaf	0.133
SRR9715741	Leaf	0.183
SRR9715739	Root	0.113
SRR9715742	Root	0.789
SRR9715743	Root	0.523

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	3.075
SRR8749028	MeJA induced 9h	6.135
SRR8749029	MeJA induced 9h	1.877
SRR8749030	Uninduced	0.723
SRR8749031	Uninduced	0.345
SRR8749032	Uninduced	0.173

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	2.608
SRR8400027	Control - Root	2.896