Gene detail

Gene detail information of Glyur000072s00008123

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G10490.1	3.00E-36	2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
NR	XP_003548081.1	6.21E-65	PREDICTED: flavonol synthase/flavanone 3-hydroxylase-like [Glycine max]
COG	YP_003514298.1	3.00E-12	2OG-Fe(II) oxygenase [Stackebrandtia nassauensis DSM 44728]
Swissprot	tr\|Q05964\|FL3H_DIACA	2.00E-19	Naringenin,2-oxoglutarate 3-dioxygenase
trEMBL	tr\|I1MKB2\|I1MKB2_SOYBN	2.00E-65	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA16G01990.1}

Sequence

Transcript Sequence

>Glyur000072s00008123.1
GAATTGTCAAGTCCTAAGCCAAAAAAAAAACCAAGCCAGAATCCGAAACAACCACATACCTCCATATAGCTAGCTAGGTAGATATATCATATAGTAATATTAACCACACAGCAGCATTTGTTCTGCAATAATGGCCACTGCCACCACGAAGCCACTCTTAACCGACCTCGCCTCCACCCTTAACCGTGTCCCCTCCAATTTCATNAGGCCCCTTGGTGACCGTCCAATTCTTCAACTCAATTCCTCCACCACTACTGCTTCCATTCCCATCGTTGACCTTCACGGTCTAAATGGCTCCAATCGTTCTCAAATCATCCAACAAATTGCCCATGCTTGCCAAAATTATGGCTTTTTCCAAATTGTGAATCATGGAGTTCCAGAGGAGGTGGTAGATAACATGGTGAATGTCTCAAAAGAATTCTTCTGTTTGCCAGAGAGTGAGAGGCTCAGGAGTTACTCTGATGACCCATCAAAGACAACAAGGCTTTCCACCAGTTTCAATGTGAAGACTGAGAAAAGAAGATGTTGCAGAGTATAGCAAACACATGAGAGGGTTATCACTGAGATTGCTTGAGGCCATATCAGAGAGCTTGGGGTTGGAAAGGGGTTACATAGACAAAGCACTAGGCAGACATGGGCAGCACATGGCCATTAACTACTACCCTCCATGTCCTGAGCCAGAGCTGACATATGGTTTGCCAGCCCATGCTGACCCAAANGCCATTACCATTCTGCTGCAGAATGATGTGCCAGGCTTGCAGGTACTCAAGGATGGCAAATGGGTAACTGTCAATCCTGTCCCTAACACCTTCGTCATCAATATTGGAGACCAAATTCAGGTGATAAGCAATGATAGGTACAAGAGTGTGCTGCATCGAGCCCTGGTGAATAGTGAGAAGGAGAGGATGTCCATTCCAACGTTCTACTGTCCATCACCAGACGCAGTAATNAGACCAGCTCCTCAACTCATAGACACTGATCATCCTGCTCAATACACAAACTTCACATACAGTGAATACTACCACAAGTTCTGGAACAGAGGGCTTTCAAAAGAAACATGTGTTGACATGTTCAAGGCTTAAATTACCTCACCCATTCTGCCAAAATTGTGCACACACACTTTCTAAACTTGGTCTCATTTGGAAGTAGACACAATTAAATGAACTAGTATTAATTTAATTAGATGAAAGATATTTGAATTTTTTGAAATTTGTAAATAGATCTTTTAGTACGCAAGTTAANTAAGAATCATTTATGTCTGTAAAGCTTAGCACAAATGGTTA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00072	143931	147634	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

Not hits found.

Not hits found.

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000072s00008123.1	PF14226.1	DIOX_N	45	128	7.60E-24

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.082
SRR1783600	control	0.080
SRR1783602	moderate drought stress	0.000
SRR1811619	moderate drought stress	0.000

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.000
DRR006520	Root Summer glycyrrhizin high producing strain	0.000
DRR006521	Root Winter glycyrrhizin high producing strain	0.173
DRR006522	Root Winter glycyrrhizin high producing strain	0.169
DRR006523	Root Summer glycyrrhizin low producing strain	0.000
DRR006524	Root Summer glycyrrhizin low producing strain	0.000
DRR006525	Leaf Summer glycyrrhizin high producing strain	78.830
DRR006526	Leaf Summer glycyrrhizin high producing strain	78.401

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	4.969
SRR2868004	Drought Stress (root)	1.921
SRR2967015	Control (root)	4.493

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	13.115
SRR9715740	Leaf	3.164
SRR9715741	Leaf	8.285
SRR9715739	Root	0.137
SRR9715742	Root	0.281
SRR9715743	Root	0.139

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	1.048
SRR8749028	MeJA induced 9h	6.158
SRR8749029	MeJA induced 9h	3.972
SRR8749030	Uninduced	10.713
SRR8749031	Uninduced	9.675
SRR8749032	Uninduced	9.086

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	0.508
SRR8400027	Control - Root	0.394