Gene detail information of Glyur000072s00008102 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G61920.1 | 4.00E-23 | |
| NR | AFK36359.1 | 5.03E-91 | unknown [Lotus japonicus] |
| trEMBL | tr|I3S7W7|I3S7W7_LOTJA | 2.00E-91 | Uncharacterized protein {ECO:0000313|EMBL:AFK36359.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00072 | 32424 | 33104 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000072s00008102.1 | PF14009.1 | DUF4228 | 1 | 217 | 3.60E-19 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 12.938 |
| SRR1783600 | control | 12.931 |
| SRR1783602 | moderate drought stress | 9.443 |
| SRR1811619 | moderate drought stress | 9.293 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 10.348 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 11.419 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.164 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.160 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 15.133 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 15.627 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 13.976 |
| SRR2868004 | Drought Stress (root) | 6.423 |
| SRR2967015 | Control (root) | 9.111 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.198 |
| SRR9715740 | Leaf | 0.279 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 25.160 |
| SRR9715742 | Root | 4.665 |
| SRR9715743 | Root | 6.548 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.246 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 10.057 |
| SRR8400027 | Control - Root | 16.541 |