Gene detail

Gene detail information of Glyur000072s00008101

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G67090.1	5.00E-148	Subtilisin-like serine endopeptidase family protein
NR	XP_003529873.2	0	PREDICTED: subtilisin-like protease-like [Glycine max]
COG	YP_004097803.1	2.00E-99	peptidase S8 and S53 subtilisin kexin sedolisin [Intrasporangium calvum DSM 43043]
Swissprot	tr\|O64495\|SDD1_ARATH	0	Subtilisin-like protease SDD1 {ECO:0000303\|PubMed:10809670} (Precursor)
trEMBL	tr\|I1KHQ1\|I1KHQ1_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA07G05610.1}

Sequence

Transcript Sequence

>Glyur000072s00008101.1
ATGGCTACCCACATTTGTCTTTGTCTATGGTTCTTCTCCTATGCTACATATGTTACAGTCATTTACACATCGGCTCAGTCTGATAATTACATTATCCACATGGACTTATCAGCCATGCCCAAAGCATTCTCAACCCAACATAATTGGTATCTATCCACTCTTTCCTCTGCATTGGAGAACAAAGTCACCACCNCCAGTACTAATTATCCTAACTCTCATATTTCATCAAAGCTGATGTATACCTACACACATGTCATGAATGGTTTCAGTGCTAGTTTGTCACCAACAGAGCTTGAAGCACTAAAAACCTCTCCCGGTTACATTTCATCCTCACGAGATTTGCCAGTGAAGCTTGACACAACACACTCACCTCAATTCCTTGGCCTCAACCCCAACTTAGGGGCATGGCCAGAATCCAAGTTTGGGAAGGATATCATTGTTGGTTTGGTGGACACTGGTGTTTGGCCAGAGAGTGATAGCTTCAATGACAATGGGATGACTAAAGTCCCTTCAAGATGGAAAGGCCAATGTGAAAACAGCATCCAATTCAATTCTTCACTTTGCAACAGGAAACTCATTGGTGCAAAGTTCTTCAACAAAGGGTTACTAGCCAAACACCCCAACATCAGCATAGTAACTGTGAACTCCACCCGTGACACAGAGGGTCACGGGACCCATACNTCAACCACCGCAGCTGGTAGCAAAGTTGAGGGTATAGCCTCACGGGCACGGGTAGCAATGTACAAGGCCCTGTGGGAAGATGGAGCATACTCATCAGATATAATGGCTGCAATTGACAGTGCAATTTCAGATGGTGTGGATGTTCTGTCCTTATCATTTGGCTCTGATGATGTACCCTTGTATGAAGACCCTGTTGCCATAGCCACATTTGCAGCCATGGAGAAAGGGATTTTCGTGTCCACCTCAGCAGGGAACGAAGGTCCTTTCCTTAAAACCCTGCACAATGGAACACCATGGGTGATAACAGTTGCTGCTGGCACTTTGGACAGAGAATTTCATGGGACTCTTACACTTGGCAATGGGGTCACAATCACTGGCCTTTCTCTCTACCCAGGAAACAACTTCACTTCCCAACATCACCATGCCCCAATTGTTTTCATGGGCATGTGTGACAAGCTCAAAGAACTGAACAAAGCAAAGGGAAAGATTGTTGTGTGTGAAGACCTTAATGGATCTTCCCTCTCTGACCAAGTCTCTAATGTTGACTTGGTAGAAGTTGTTGGGGCTGTGTTCATATCAAACAGCTCCGACAGTTTGTTCTTCTTGCAAAATAGCTTTCCATCCATCATCATTGACTTTACCAATGGAAAAATTGTCAAATCCTACATCAGAAGTACCAACAGCTCTGCCTCAAAAGCAAGCATGTCTTTTAAGGTAACAGTTTATGGTACAAGACCAGCACCGAGTGTGGATAGTTACAGTTCAAGAGGGCCATCGAGTAGTGTTCCAAATGTGTTGAAACCAGACATCACGGCACCTGGTACATTAATCCTAGCTGCATGGCCTAAAAAGGTTCCAGTGGCAGAGTTTGGGCCCCATAAAAAACTCTTCAGCAATTTCAATTTGATAAGTGGAACATCCATGGCATGCCCTCATGTTGCGGGCGTGGGAGCACTTTTAAAAGGGGCACACCCTGATTGGAGCCCTGCAGCAATTCGATCAGCAATTATGACAACATCGGATATATTTGACAACACCATGGGACTCATCAAAGACACTGGCAAAGGTTATAAAACAGCTTCTCCTCTTGCATTGGGTGCTGGTCATGTTAACCCCAATAGAGCAATTGACCCTGGACTTGTCTATGATGCGGGTGTNCAGGATTATGTGAATCTTCTATGTGGACTTAACTTTACACGGGAGAATATTACTGCCATCACGAGATCCTCTTCTAATTATAATAACTGTTCCAAGTCTAACCATTCCTTGGATCTCAACTACCCTTCTTTTATTGCTTTCTTCAAATATAATGACTCTTCTAATTCAAGGACAGCACGGGAATTTCACAGGACAGTGACTAATGTTGGGGAGGGACAAACTACTTATGTTGCTAGCGTTACTCCCATTGAAGGGTTCCGTGTCAGTGTCTCCCCCAACAAGTTGGTGTTCAAGGAGAAGAACGAGAAGCTAAAGTACAAATTGACGATTATTATTGATGGTGCAAGAAGAAAGACGAATGGGAAGAAGAAAGTAGCTTTTGGATATCTAACTTGGACGGATGTGAAGCATGTGGTTAGAAGCCCTATTGTGGTCACCACCCTCAAATTCTAA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00072	23083	25726	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006508 proteolysis

molecular_function
GO:0004252 serine-type endopeptidase activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000072s00008101.1	PF05922.11	Inhibitor_I9	30	118	5.20E-12
Glyur000072s00008101.1	PF00082.17	Peptidase_S8	147	604	8.00E-40

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	1.469
SRR1783600	control	1.462
SRR1783602	moderate drought stress	0.921
SRR1811619	moderate drought stress	0.928

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.000
DRR006520	Root Summer glycyrrhizin high producing strain	0.000
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	0.000
DRR006524	Root Summer glycyrrhizin low producing strain	0.000
DRR006525	Leaf Summer glycyrrhizin high producing strain	43.022
DRR006526	Leaf Summer glycyrrhizin high producing strain	42.502

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	0.000
SRR2868004	Drought Stress (root)	0.000
SRR2967015	Control (root)	0.000

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	18.089
SRR9715740	Leaf	16.050
SRR9715741	Leaf	6.650
SRR9715739	Root	0.140
SRR9715742	Root	0.081
SRR9715743	Root	0.106

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.000
SRR8749028	MeJA induced 9h	0.000
SRR8749029	MeJA induced 9h	0.000
SRR8749030	Uninduced	0.000
SRR8749031	Uninduced	0.000
SRR8749032	Uninduced	0.000

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	0.222
SRR8400027	Control - Root	1.282