Gene detail information of Glyur000071s00005300 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G28395.3 | 3.00E-16 | |
| NR | KEH36563.1 | 9.39E-44 | hypothetical protein MTR_2g014370 [Medicago truncatula] |
| trEMBL | tr|A0A072V5C7|A0A072V5C7_MEDTR | 4.00E-44 | Uncharacterized protein {ECO:0000313|EMBL:KEH36563.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00071 | 390301 | 393038 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 22.264 |
| SRR1783600 | control | 22.742 |
| SRR1783602 | moderate drought stress | 13.113 |
| SRR1811619 | moderate drought stress | 13.117 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 17.994 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 17.639 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 12.215 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 11.668 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 16.560 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 15.285 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.805 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.501 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 39.018 |
| SRR2868004 | Drought Stress (root) | 18.674 |
| SRR2967015 | Control (root) | 19.764 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 14.480 |
| SRR9715740 | Leaf | 11.231 |
| SRR9715741 | Leaf | 11.069 |
| SRR9715739 | Root | 36.854 |
| SRR9715742 | Root | 22.130 |
| SRR9715743 | Root | 22.891 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 125.813 |
| SRR8749028 | MeJA induced 9h | 58.032 |
| SRR8749029 | MeJA induced 9h | 109.056 |
| SRR8749030 | Uninduced | 28.838 |
| SRR8749031 | Uninduced | 19.188 |
| SRR8749032 | Uninduced | 46.975 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 38.838 |
| SRR8400027 | Control - Root | 33.155 |