Gene detail information of Glyur000071s00005299 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_003546006.1 | 1.61E-61 | PREDICTED: uncharacterized protein LOC100807787 isoform X1 [Glycine max] |
| trEMBL | tr|K7MA78|K7MA78_SOYBN | 6.00E-62 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA15G08406.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00071 | 385367 | 387676 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.815 |
| SRR1783600 | control | 0.853 |
| SRR1783602 | moderate drought stress | 2.418 |
| SRR1811619 | moderate drought stress | 2.262 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.261 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.540 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.256 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.158 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.447 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.351 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.846 |
| SRR2868004 | Drought Stress (root) | 1.169 |
| SRR2967015 | Control (root) | 1.231 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.219 |
| SRR9715740 | Leaf | 2.705 |
| SRR9715741 | Leaf | 2.969 |
| SRR9715739 | Root | 0.276 |
| SRR9715742 | Root | 1.703 |
| SRR9715743 | Root | 1.204 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.077 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.162 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 6.006 |
| SRR8400027 | Control - Root | 6.169 |