Gene detail information of Glyur000071s00005298 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G28400.1 | 6.00E-05 | |
| NR | KHN18948.1 | 5.79E-70 | Protein E6 [Glycine soja] |
| Swissprot | tr|Q01197|E6_GOSHI | 2.00E-22 | Protein E6 |
| trEMBL | tr|C6TKC2|C6TKC2_SOYBN | 3.00E-68 | Putative uncharacterized protein {ECO:0000313|EMBL:ACU23362.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00071 | 380371 | 381225 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 379.231 |
| SRR1783600 | control | 385.645 |
| SRR1783602 | moderate drought stress | 306.878 |
| SRR1811619 | moderate drought stress | 284.389 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 656.024 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 644.900 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.131 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.127 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 151.303 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 153.014 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 74.706 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 71.471 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 300.794 |
| SRR2868004 | Drought Stress (root) | 182.642 |
| SRR2967015 | Control (root) | 182.857 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 14.153 |
| SRR9715740 | Leaf | 6.197 |
| SRR9715741 | Leaf | 9.457 |
| SRR9715739 | Root | 18.691 |
| SRR9715742 | Root | 24.445 |
| SRR9715743 | Root | 23.164 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.067 |
| SRR8749028 | MeJA induced 9h | 5.714 |
| SRR8749029 | MeJA induced 9h | 4.245 |
| SRR8749030 | Uninduced | 5.054 |
| SRR8749031 | Uninduced | 5.506 |
| SRR8749032 | Uninduced | 1.684 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 468.320 |
| SRR8400027 | Control - Root | 630.396 |