Gene detail information of Glyur000071s00005297 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G33855.1 | 7.00E-32 | |
| NR | XP_004485830.1 | 9.02E-83 | PREDICTED: uncharacterized protein LOC101508580 [Cicer arietinum] |
| trEMBL | tr|B9H2R0|B9H2R0_POPTR | 3.00E-74 | Uncharacterized protein {ECO:0000313|EMBL:EEE85627.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00071 | 375324 | 375779 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.139 |
| SRR1783600 | control | 3.178 |
| SRR1783602 | moderate drought stress | 4.129 |
| SRR1811619 | moderate drought stress | 4.087 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.176 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.169 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.468 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.658 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.639 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.442 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.216 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.854 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.777 |
| SRR2868004 | Drought Stress (root) | 1.400 |
| SRR2967015 | Control (root) | 1.505 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.249 |
| SRR9715740 | Leaf | 5.855 |
| SRR9715741 | Leaf | 2.972 |
| SRR9715739 | Root | 2.023 |
| SRR9715742 | Root | 2.183 |
| SRR9715743 | Root | 1.267 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.244 |
| SRR8749028 | MeJA induced 9h | 4.533 |
| SRR8749029 | MeJA induced 9h | 3.921 |
| SRR8749030 | Uninduced | 4.719 |
| SRR8749031 | Uninduced | 3.533 |
| SRR8749032 | Uninduced | 11.563 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.673 |
| SRR8400027 | Control - Root | 3.232 |