Gene detail information of Glyur000071s00005296 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G28410.1 | 3.00E-37 | |
| NR | XP_004485831.1 | 1.54E-154 | PREDICTED: uncharacterized protein LOC101508896 [Cicer arietinum] |
| trEMBL | tr|C6TIH8|C6TIH8_SOYBN | 7.00E-142 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G30930.4} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00071 | 370517 | 374778 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.088 |
| SRR1783600 | control | 4.218 |
| SRR1783602 | moderate drought stress | 2.802 |
| SRR1811619 | moderate drought stress | 2.916 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.944 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.627 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.253 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.065 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.797 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.875 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.028 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.814 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.525 |
| SRR2868004 | Drought Stress (root) | 4.033 |
| SRR2967015 | Control (root) | 3.094 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.436 |
| SRR9715740 | Leaf | 1.697 |
| SRR9715741 | Leaf | 1.495 |
| SRR9715739 | Root | 1.533 |
| SRR9715742 | Root | 1.234 |
| SRR9715743 | Root | 1.012 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 6.563 |
| SRR8749028 | MeJA induced 9h | 4.767 |
| SRR8749029 | MeJA induced 9h | 4.075 |
| SRR8749030 | Uninduced | 1.122 |
| SRR8749031 | Uninduced | 0.577 |
| SRR8749032 | Uninduced | 0.646 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 5.729 |
| SRR8400027 | Control - Root | 6.617 |