Gene detail

Gene detail information of Glyur000071s00005291

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G20560.1	3.00E-140	DNAJ heat shock family protein
NR	XP_004485833.1	0	PREDICTED: dnaJ homolog subfamily B member 1-like [Cicer arietinum]
COG	YP_003690643.1	2.00E-48	chaperone DnaJ domain protein [Desulfurivibrio alkaliphilus AHT2]
Swissprot	tr\|Q9LZK5\|DNJ19_ARATH	7.00E-46	DnaJ protein ERDJ3B (Precursor)
trEMBL	tr\|A0A067JNB8\|A0A067JNB8_JATCU	0	Uncharacterized protein {ECO:0000313\|EMBL:KDP21009.1}

Sequence

Transcript Sequence

>Glyur000071s00005291.1
TTCTCTTTTTTTTTTTAAATTCTGATCTAGACCATTGATTTCATCTTACCATAGTAGAAAAAAAAATTGGTCCCCCGATAAAAGGCTTAACTAAATTGTCCACCTTAGAATTCCGATCTGGATCCTCTCAAGCAGGCATTTGTCTACTGCCCTCTGCAGCATTGATTGGAAGATAAAAAAAACAACACCCAAATCAACCAACTTGCAACTCGCCTCCTCCTTTGAACAACCATCTTCTCTCTCCTCTGCCTCTCTGCCTCAACTTGATTAAGCGACTGCCGACTCCTCTCTGTCATTCGCCTTCTGCGGCCGTTTCTCCGGTGGTTGCACTGCCTTGCCGCTGTCAGCCTTGTTCACCACGGAGGCTTCGGAATTGCTGCCTCTGGCAACGGCAACTGTACCAGCGCCGGATTTCACATTCGAAGCCGGTAGGATCACACCGGCAATGACTTCATGGTGCTCGAGAAGTTCAGTTTCTTCGGGAAGAATCCCTTGTTCTATTGGCGGTGAGTGTTGGGAACGTGTCCGTCGGAGTACTGGAAGAGCCAAGTGTTTCAAACTGAAGTGTGCAGCAGGTCTTGCCATTGCCAGTTGTTGCATTTGTTGTAACGACGTTGACGGAATCCACGATCTCAATTCCCCCGGAGGAGGGATCGTTGAGCCAAAGGGAGAAAGGGTCATTAATGTGCTTTTTAATATCCCAACCGTTAGATTAATCTAACGGTTGGACTTATTGCTGTAGAGGGCTGTAAACAAATGCCTAGTGGAGACGATCCGGGTGCTTACAATTCACGTTTATAAGCCGTCTTTTTGTATTGAGATTTTTCAAGGCATGGTTGCATTTTTGGTGGTGCGATTTGGGTTTTTTCTTGTTATTCTTTATTATTAAAAAAAAATAACTTTAGTTTGTTTTCTAGTCTGTTTCAAAAAATTTCATAATTAAAACTTAAATTTAATTTAAGTTTTTTAAATACAATTTAGCTGGAAATAATACAGCGGGGGCTGGTTAAGATAAGCAACCTTTGTGGGGTCCATTAAAATACAGATGTCACCTTAAATCATACATATACCAGAAAACTCGTCCAGGATGCTTGTAGGCCTGGAAAGTTCTACACCCTTCTGGTGTCGTTGGTGCACTGCGCACCTTCCAGATAAATCCTTCTCATTCTTATTCTCATTCTCCACTCTAGTAATATTAATATTTACTCACTGAATCTTTAAAATCTGATTCTACCTTTTGAACTATCACCTACAATATTCAGCAACAAAACAGAACAGAAGCTTGAACAGAACAAACACCCTTGTTGTAGATAGGGAAAAAGACCCATCCAAGAGCAAAGTAATTAAGTCTCGAAACATGGGCGTAGACTACTATAAGATTTTGCAGGTTGACAAGAATGCCACAGAGGAGGAATTGAAGAAAGCATATAGAAAGCTTGCCATGAAATGGCACCCTGACAAGAACCCCAACAATAAGAAAGAGGCTGAGACCAAATTCAAACAGATATCCGAAGCCTACGAGGTTCTAAGTGATCCCCAGAAGAGAACGATTTATGATCAGTACGGAGAAGAAGGGCTTAAAGGGCAAGTGCCACCACCAGATGCAGGTGGGGCTTCATTCTTCCAAACTGGAGACGGCCCAACAACGTTCAGGTTCAATCCCAGAAATGCAGACGACATCTTTGCCGAGTTTTTCGGGTTTTCAAGCCCGTTTGGAGGAATGGGTAGTGGTGGTGGTGGTGGTGGAATGAGGGGTGGTGGGGCCAGGTCCTTTGGTGGAATGTTTGGGGATGATATATTTGCTTCATTTGAAGAAGGCAGGCCCATGCGTCAGGGTCCTCGCAAAGCACCTCCAATTGAAAATACACTACCTTGTAGCCTTGAGGAGCTCTACAAGGGCACCACCAAAAAGATGAAGATCTCAAGGGAAATTGCAGATGCAAGCGGGAAAACTTTGCCCGTGGAGGAAATCTTAACCATTGAAATTAAACCCGGGTGGAAAAAGGGGACAAAAATCACTTTCCCCGAGAAAGGAAATGAGCAGCCAAATGTAACTGCAGCGGATCTCGTGTTTGTCATTGATGAGAAGCCCCACAGTGTGTTTACAAGGGATGGTAATGATCTGGTTGTGACACAGAAGGTGTCACTCGCAGAGGCTCTAACAGGCTACACCGTGCGTCTCACAACTCTAGATGGCAGGGTTCTGAACATTCCCATAAACAATGTGATTCATCCAACCTATGAAGAGGTTGTCCCCAGGGAAGGAATGCCTATTCCAAAAGACCCTTCAAAGAAGGGTAATCTTAGGATCAAATTCAACATCAAGTTCCCAGCAAGGTTGACATCAGAGCAGAAAGCTGGAATTAAGAAACTTCTGGCTCCATAATAGACACTGTAAACTGTATAGTGCATTTTGTGTGTAGTATTCCAATTATCCTCATCCATTTTATAGGACTTTGATTTTTGCAGTTTGTGTGTAATATGTTACATGGTGTACTGTCATCCACACCGACAACATTTGGTTGAGGATTA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00071	353622	356755	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006457 protein folding

molecular_function
GO:0051082 unfolded protein binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000071s00005291.1	PF00226.26	DnaJ	4	67	9.30E-30
Glyur000071s00005291.1	PF01556.13	CTDII	255	334	5.30E-21

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	5.372
SRR1783600	control	5.496
SRR1783602	moderate drought stress	7.989
SRR1811619	moderate drought stress	7.898

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	17.880
DRR006520	Root Summer glycyrrhizin high producing strain	17.729
DRR006521	Root Winter glycyrrhizin high producing strain	11.455
DRR006522	Root Winter glycyrrhizin high producing strain	11.146
DRR006523	Root Summer glycyrrhizin low producing strain	8.636
DRR006524	Root Summer glycyrrhizin low producing strain	8.790
DRR006525	Leaf Summer glycyrrhizin high producing strain	2.805
DRR006526	Leaf Summer glycyrrhizin high producing strain	2.801

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	3.441
SRR2868004	Drought Stress (root)	1.924
SRR2967015	Control (root)	1.837

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	1.941
SRR9715740	Leaf	3.738
SRR9715741	Leaf	3.361
SRR9715739	Root	2.136
SRR9715742	Root	4.434
SRR9715743	Root	4.578

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	1.606
SRR8749028	MeJA induced 9h	2.526
SRR8749029	MeJA induced 9h	1.105
SRR8749030	Uninduced	0.494
SRR8749031	Uninduced	0.563
SRR8749032	Uninduced	0.745

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	5.132
SRR8400027	Control - Root	5.941