Gene detail information of Glyur000071s00005287 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G46090.1 | 4.00E-79 | Protein of unknown function (DUF679) |
| NR | KHN08488.1 | 3.13E-130 | hypothetical protein glysoja_014253 [Glycine soja] |
| trEMBL | tr|I1M1Z2|I1M1Z2_SOYBN | 1.00E-130 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G30840.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00071 | 332329 | 332964 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000071s00005287.1 | PF05078.7 | DUF679 | 43 | 206 | 2.40E-67 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.002 |
| SRR1783600 | control | 2.427 |
| SRR1783602 | moderate drought stress | 1.551 |
| SRR1811619 | moderate drought stress | 1.863 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.599 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 8.086 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.066 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.604 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 8.873 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 11.266 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.430 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.305 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.000 |
| SRR2868004 | Drought Stress (root) | 1.286 |
| SRR2967015 | Control (root) | 0.973 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.315 |
| SRR9715740 | Leaf | 0.093 |
| SRR9715741 | Leaf | 0.232 |
| SRR9715739 | Root | 0.169 |
| SRR9715742 | Root | 1.113 |
| SRR9715743 | Root | 1.855 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.648 |
| SRR8749028 | MeJA induced 9h | 0.941 |
| SRR8749029 | MeJA induced 9h | 0.500 |
| SRR8749030 | Uninduced | 0.662 |
| SRR8749031 | Uninduced | 0.472 |
| SRR8749032 | Uninduced | 0.610 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.031 |
| SRR8400027 | Control - Root | 0.225 |