Gene detail information of Glyur000071s00005276 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G28480.1 | 3.00E-34 | Thioredoxin superfamily protein |
| NR | XP_003546009.1 | 1.14E-61 | PREDICTED: glutaredoxin-C9-like [Glycine max] |
| Swissprot | tr|Q9SGP6|GRXC9_ARATH | 1.00E-42 | Glutaredoxin-C9 |
| trEMBL | tr|I1MEN6|I1MEN6_SOYBN | 4.00E-62 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA15G08520.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00071 | 280349 | 280765 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000071s00005276.1 | PF00462.19 | Glutaredoxin | 50 | 110 | 6.10E-10 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.714 |
| SRR1783600 | control | 0.893 |
| SRR1783602 | moderate drought stress | 0.734 |
| SRR1811619 | moderate drought stress | 0.819 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.209 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.788 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.268 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.052 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 24.121 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 24.212 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 88.041 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 86.689 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 28.636 |
| SRR2868004 | Drought Stress (root) | 74.294 |
| SRR2967015 | Control (root) | 82.087 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 440.050 |
| SRR9715740 | Leaf | 120.728 |
| SRR9715741 | Leaf | 513.674 |
| SRR9715739 | Root | 42.747 |
| SRR9715742 | Root | 64.614 |
| SRR9715743 | Root | 56.621 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 53.219 |
| SRR8749028 | MeJA induced 9h | 68.699 |
| SRR8749029 | MeJA induced 9h | 52.420 |
| SRR8749030 | Uninduced | 32.153 |
| SRR8749031 | Uninduced | 11.392 |
| SRR8749032 | Uninduced | 14.744 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 12.748 |
| SRR8400027 | Control - Root | 9.430 |