Gene detail information of Glyur000071s00005260 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G28540.1 | 1.00E-25 | |
| NR | XP_003593683.1 | 2.62E-40 | hypothetical protein MTR_2g014970 [Medicago truncatula] |
| trEMBL | tr|G7IFI3|G7IFI3_MEDTR | 1.00E-40 | Transmembrane protein, putative {ECO:0000313|EMBL:AES63934.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00071 | 195671 | 197970 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 26.569 |
| SRR1783600 | control | 26.619 |
| SRR1783602 | moderate drought stress | 28.329 |
| SRR1811619 | moderate drought stress | 29.603 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 15.173 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 13.445 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 18.576 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 20.498 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 11.515 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 11.273 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.930 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.186 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 6.433 |
| SRR2868004 | Drought Stress (root) | 5.556 |
| SRR2967015 | Control (root) | 6.788 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.942 |
| SRR9715740 | Leaf | 5.279 |
| SRR9715741 | Leaf | 2.190 |
| SRR9715739 | Root | 11.768 |
| SRR9715742 | Root | 9.380 |
| SRR9715743 | Root | 8.699 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 8.848 |
| SRR8749028 | MeJA induced 9h | 7.302 |
| SRR8749029 | MeJA induced 9h | 6.403 |
| SRR8749030 | Uninduced | 2.987 |
| SRR8749031 | Uninduced | 0.435 |
| SRR8749032 | Uninduced | 1.177 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 10.995 |
| SRR8400027 | Control - Root | 7.891 |