Gene detail information of Glyur000071s00005244 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00071 | 116380 | 116813 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000071s00005244.1 | PF13456.1 | RVT_3 | 1 | 53 | 4.40E-06 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.302 |
| SRR1783600 | control | 6.685 |
| SRR1783602 | moderate drought stress | 6.219 |
| SRR1811619 | moderate drought stress | 8.212 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.461 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.747 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.949 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.243 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.185 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.334 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 16.447 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 13.824 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.538 |
| SRR2868004 | Drought Stress (root) | 2.689 |
| SRR2967015 | Control (root) | 3.117 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.549 |
| SRR9715740 | Leaf | 3.690 |
| SRR9715741 | Leaf | 3.831 |
| SRR9715739 | Root | 0.184 |
| SRR9715742 | Root | 2.234 |
| SRR9715743 | Root | 1.231 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 6.115 |
| SRR8749028 | MeJA induced 9h | 10.214 |
| SRR8749029 | MeJA induced 9h | 6.302 |
| SRR8749030 | Uninduced | 4.796 |
| SRR8749031 | Uninduced | 3.034 |
| SRR8749032 | Uninduced | 4.578 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 5.246 |
| SRR8400027 | Control - Root | 4.282 |