Gene detail

Gene detail information of Glyur000071s00005240

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G29120.1	7.00E-107	glutamate receptor 2.7
NR	XP_003541713.1	0	PREDICTED: glutamate receptor 2.7-like isoform X1 [Glycine max]
COG	YP_007133144.1	2.00E-18	amino acid ABC transporter substrate-binding protein, PAAT family [Stanieria cyanosphaera PCC 7437]
Swissprot	tr\|Q8LGN0\|GLR27_ARATH	2.00E-130	Glutamate receptor 2.7 (Precursor)
trEMBL	tr\|K7M1F3\|K7M1F3_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA13G30650.2}

Sequence

Transcript Sequence

>Glyur000071s00005240.1
GTCATAATTCTTGAGCCGCCAATATGAATTTTTATGCCCAAACTTGGAACAACGCAGTTCCAAACCTCTTGCTTTGGCTTCCTCTAATAATCTCGCTTCTCCCATTCCAATGCCTTATGTTAGGAGCCCAGGCTGCCAACAGTTCCCAAGAGACAAGTGTTGCTGTTGGTGTGATCATTGATGTTAATTCTGAGACGGGGAAACAGCAGAGAAGAGCCATGCAAATTGCGGCTCTAAGTTTCAATAATTATTCCAAGACTCAAAACATAAGCCTCTTCTTCCGCGACTCTGGCAGAAACCCATTACAAGCAGCTTCAGCTGAATTGATTGCTAAGAAGAAAGTTGAAGTCATTATTGGCATAGAGACATGGCAAGAAGCAGCTCTAGTTGCTGACCTTGGATCCAAGGCTCAAGTACCAACAATTTCATTTTCTGCTCCCCCATTAGTCCCTCCATTAATGCATCTTCGTTGGCCTTTCTTGATCNAAATGGCTAAGAATCAGACTGCACACATGAACTGCATAGCAGATATTATCCATGCCTGCAACTGGCAAAAGGTTATAGCTATATATGAAGACGACCCTTATAGTGGTGATTCTGGAATGTCAAGCCTCTTATCCGAGGCTCTCCAAGAGGTTAACTCGCAGATTGAGTATCGATTAGTCCTTCCACCATTCACTTCTTTATCTGATCCAAAAGGGGTTGTTCTTGATGAACTTCTTAAGTTGTTGCCACTGAAATCCCGTGTTTTTGTTGTACTTCAAGCATCATTACCTATGGTGACCCATCTGTTCAGAGAAGCTAAGAAAGTCGGATTCTTGGAGAAAGATTCAGCTTGGATAATCAATGAGGGGATTACAAGTATGTTGGACCAAGTCAATAAATCTGTCCTATCCTCTATGGAAGGCACTGTGGGGATCAGAACCTACTATTCTACAAACTCTAGTGCTTATACTCGGTTGAAGGAAAATTTCCAAGCTGAACATACAGAAACAGTTGGGTCAAAACCAGGATCAAATGCTCTGCGAGCTTATGATAGCATTACAATTGTCACAAAGGCCTTGGAGAAAATGGATACCAATTCTAGCAGCTCAAAGATGTTCTTGGAGGAAATGCTATCTGCCAATTTCAATGGTTTGAGTGGTAATATNAGATTCAAAGAAAGACACCTATCGTACACTCCAATATTAAGAGTCATAAACATTGTTAATAAGAAATATGCGGAATTGGACTTTTGGACCCCGGAGTTGAAGTTTGCTACATCTCTCAAAATACTGAAAGGCAGAGAGAAAAGAGGTGATCATGCTACAAAAAGCTTAATTGGCTCAGTGGTTTGGCCAGGAGGCCTAATTTCTGTACCTAAGGGTTGGAAAGTACCTACCAATGCAAACCCTTTAAAAGTCGCAATTCCTGTGAACCCTGCTTTTGATAAATTCTTGAAGGAAGTCTCCCCAAATGAATATACCGGTTTTTGTATTGATCTTTTCTACAGGGTCCGAGAAATTCTGAGTGACGATTATTATGGTCTGCCCTTTAAATTTCACCCCGTAAATGAATCCTATGATACACTTCTGCTGAAAGTCATGAATGAGTCCTATGATGCTATTGTAGGAGATGTAACAATACTTGCCAGCCGAGCAAAGAATGTGTCATTCACTCAACCATACACTGAGTCAGGCTTATCGCTGATACTTCCAGCAGAGACTGAAGGGTCAGCATGGTTGTTTCTAAAACCATTTAGCTGGGGAATGTGGATTGCAACTATTGGCATCCTCATCTACACAATTTTTATCATTTGGTTCCTGGAGCATCATTTGAATCCGGAATTTGGTGGACCATTGAAAACTCAGATCAGCACCACACTGTGGTTTGCTTTTACTTCTCTATTTTTTGCTCATAGGGAGAACATAAACAGCAACTCTGCACGATTAGCAGTTGGAGTATGGTTATTTCTTGTGTTTGTTCTAACCTCAAGCTACACTGCCAACCTTTCTTCATTGCTTACTGTCCAACGGTTGAAGTCTGGAAGAGACATTGAGTGGCTTAAACAAAACAATCTGCCAGTTGGTTGTGATAACAGCAGTACCTTTCTAAAGGACTACTTGGTCGAAGTGTATGATTTCAATCCCAAGCAAGTAATAGAGGTTGATGGAGAATATGACATTGTGGATAAATTCAATAGCAAAAGAATCTCTGCTCTCTTTCTTGAGAGCCCATATGAAAAGGTTTTCTTGAATAAGTACTGCAATGATTACACTGCAATTACAGCAGCCTATAAATTTGGAGGAATGGGATTTGTATTCCAAAAAGGGTCTCCCATGACAAANGACTTTTCTGAAGCCATTTTAACACTAGCAGAAAATGGAAAGCTAAAAGCTTTGGAAGAGGAATGGTTGACACCTTCCAAGGAATGCCCAAGCAACTCAACTTCTCCAGAAACCGAGAGCCTAACCNTCGACAAATTTTGGGGTCTCTATATCATATGTGCTGCCACTTCCACCATCTGCTTAGTATTGGCCTTACTGAAGAAGAATTACCTCCATAACCATAACCACAACAACCATGAAGAGGAAGAAGCTCAACTTCAGGGAAATGTAACCGCTGATGATGATAATGATAATAGTGTTGGGAATAAGGCACCTGGAATAATAGGTACAGGCTTATTATACAATGGGAATCTCAAAACTTTAAATAAAGCTGCAACATTTGGCGGTTTACGTCGTCGAAATTCCTCAAGGTTGGAGAGTATAAGCATTTCTGAGGAACTGGGCAATCCACAGCGCTCCCAATCAGCTGTCATAGAAATTTATGGTGGTAGACTGCTAGTAGCTTGTGTGAGCAAAAGATACCGAAGCAAAATGCATTTCCCTTCAACTATTCCTCAAGCACATGCAAGAATTTGGCTATTATTCTTTTATTTACTCATCCCTTTTGTTCTCATTGATGGTAACCGAGACAATTCTACCAATTCAGACACCAAAGTTATATCTATTGGGGTGATCAATGATGTTAATTCTCGCATTGGGAAAGAACAGCAAGTAGCCATGGACATTGCAGCCCNGAGTTACAATAGCACTTCAAAGAACTACAAGCTGGCTCTCTATTTTCNGAACTCCACCAAGGATCCCCTCAGAGCCACCAAACTTGAAGCAGCTATAGTGGCTGAAATAGGAAGCCAAGCTCAAGTTCCTACCATATCCTTTGCAGCACCTACCATAACCCCACCATTGATGACGGTTCGATGGCCTTTTCTGGTGAGACTGGCCAACAATGGTACAGCATATATAAAATGCATTGCAGATATAGTGCAAGCTTATAGCTGGCAGAGAGTAGTAGTCATCTATGAAGATGATGGGTACGGTGGAGATTATGGGATGCTAGCACTACTATCTGAGGCCCTTCAGGATGTGAGTTCAATGATTNAGTACCGCTTAGCGCTTCCACCGGTTTCTTCTCTACATGATCCAGGAGAGCTAGTTCGTGAAGAGATGCTCAAGTTAATGCAAACACAATCCAGGGTGTTCATTGTGCTGCAATCATCATTGGAAATGGCTATTCATCTGTTCAGAGAAGCTTCGAAAATGGGACTCGTGGATAGAGAATCGGTNTGGATAATCCCAGAGAGCATAACCAATTTGCTGGAATCTGACAATAAGTCTGCTCTTTCCTATATGGAAGGAGCCTTAGGAATTAAGACCTACTACTCCGAAAGAAGCAGTGAGTATCAAGATTTTGAGGCTCAGTTCCGGAGAATTTTTTGGTCAAGGAATCCNGAGGAAGATAACCGCTACCCAGGATTTTATGCACTGCAAGCATATGATAGCATTAACATNGTCACTCAAGCAATCAACAGAACGACCAGCAGAAACAGTAGCACTTCAAATTCAAAAACTTTACCAAGAGAAATACTATCTAGCAGTTTCAAAGGTTTAAGTGGCCATATTCAATTTGAAAATGGGCAACTCTTGCAGAACCCTGTCTTAAGGATAGTAAATGTGGTTGGGAAGAGTCACAAGGAGTTATGCTTTTGGACTCAACAACATGGTTTCACTACAACCCTCCATACNGGAGGAAAAGGTGGAAATCTTGTTGCTGGAAATACAGAATGTTTCAGGGGTGTGCGTTGGCCTGGGAATTTAGACCGGGATCCAAAGGGATGGAACATGCCTACTAAACAAAATCCATTGAGAATAGCAGTCAGAAGCAGAACCTCGTTTTCTANGTTTGTCAAGGTTGTGTATGGCCAGAATAAAAAACCTGTAGAATACAAGGGATTCTGCATTGAGATTTTTGAGCATGTTCACAGACTTTTGGGGTACGATCTGCCNTATAAGTATTATCCAATTGATGGAACCTATAATGATTTGGTTCAGCTTGTCTATAACAAGTCTGAAGAATCAGCATGGATGTTTATGAAGCCCTTTACCTGGGAATTGTGGATGGTTACAGTTTGGTATCTTGAGAGAGAACCAAATCCAGAGTTTCATGGCAATTGGAAGAGCCAGCTCAGCACGGCTCTTTGGTTTACCTTCTCCTCTCTATTCTTCGCTCATAGGGAAAAAATGCACAGCAACTTAACTCGAGTGGTTATGGTCTCATGGCTCTTTCTAGTATTGATTGTTAACTCAAGCTACACTGCTAGTCTTTCTTCAATGCTCACAGTCAAACAACTGCAACCAAATGTCACAGACATTCAGTGGCTGAAGAGGAACAACATGAAAATTGGTTGTGATGGTGACTCATTTGTGAGGTCNTTCCTAGAAAAAGTAGAAAGTTTCAAGCCAGAGAACATCATAAACATTACTGATGAATACAAGTATGATGATGCATTCACAAATAACAGCATAGCAGCTGCCTTTCTTGAGCTCCCATATGAGAAAGTGTTCATTAGTGAANACTGCAAGAGATACACTGGCTCCACTCCCAGAACAAGATTTGGAGGATTGGGCTTTATGTTCCAGAAAGGCTCCCCTGTGGCCAGAGACGTTTCTAAAGCTATATTAAATCTCTCAGAAAAAGCAGAACTGAAGAGATTGGAAGAAAAGTGGTTAATTACCTCGCAGNATTGCTCCAACAACGTGACCTCCTCCAACAATATGGAAAGTTTGAAGCTTGGAAGCTTATGGGTTCTATATGTCATCTCTGGTGCCACTTCCACTATTTGTCTCCTAATATCAACCTTCCAGTGTCTANAGTCCAATCAGCAACATGGAGAAGAAGTGCCCCTAGAACTAGAAGGCAATAATAATGGCACACACAGTGATGAAAGGGTGTGGGAAAAGTTCATTACTTTTGCAAAGCAGATTTATAACAAAAAGGGTGTAACTGATGCTGATGCTGATACCCCAAAGCATCCACAGCAAGTGGCTTCTCCAGAGTACCTGAACGAGCAGAGCAGTAATTAA

Protein Sequence

>Glyur000071s00005240.1
MNFYAQTWNNAVPNLLLWLPLIISLLPFQCLMLGAQAANSSQETSVAVGVIIDVNSETGKQQRRAMQIAALSFNNYSKTQNISLFFRDSGRNPLQAASAELIAKKKVEVIIGIETWQEAALVADLGSKAQVPTISFSAPPLVPPLMHLRWPFLIXMAKNQTAHMNCIADIIHACNWQKVIAIYEDDPYSGDSGMSSLLSEALQEVNSQIEYRLVLPPFTSLSDPKGVVLDELLKLLPLKSRVFVVLQASLPMVTHLFREAKKVGFLEKDSAWIINEGITSMLDQVNKSVLSSMEGTVGIRTYYSTNSSAYTRLKENFQAEHTETVGSKPGSNALRAYDSITIVTKALEKMDTNSSSSKMFLEEMLSANFNGLSGNXRFKERHLSYTPILRVINIVNKKYAELDFWTPELKFATSLKILKGREKRGDHATKSLIGSVVWPGGLISVPKGWKVPTNANPLKVAIPVNPAFDKFLKEVSPNEYTGFCIDLFYRVREILSDDYYGLPFKFHPVNESYDTLLLKVMNESYDAIVGDVTILASRAKNVSFTQPYTESGLSLILPAETEGSAWLFLKPFSWGMWIATIGILIYTIFIIWFLEHHLNPEFGGPLKTQISTTLWFAFTSLFFAHRENINSNSARLAVGVWLFLVFVLTSSYTANLSSLLTVQRLKSGRDIEWLKQNNLPVGCDNSSTFLKDYLVEVYDFNPKQVIEVDGEYDIVDKFNSKRISALFLESPYEKVFLNKYCNDYTAITAAYKFGGMGFVFQKGSPMTXDFSEAILTLAENGKLKALEEEWLTPSKECPSNSTSPETESLTXDKFWGLYIICAATSTICLVLALLKKNYLHNHNHNNHEEEEAQLQGNVTADDDNDNSVGNKAPGIIGTGLLYNGNLKTLNKAATFGGLRRRNSSRLESISISEELGNPQRSQSAVIEIYGGRLLVACVSKRYRSKMHFPSTIPQAHARIWLLFFYLLIPFVLIDGNRDNSTNSDTKVISIGVINDVNSRIGKEQQVAMDIAAXSYNSTSKNYKLALYFXNSTKDPLRATKLEAAIVAEIGSQAQVPTISFAAPTITPPLMTVRWPFLVRLANNGTAYIKCIADIVQAYSWQRVVVIYEDDGYGGDYGMLALLSEALQDVSSMIXYRLALPPVSSLHDPGELVREEMLKLMQTQSRVFIVLQSSLEMAIHLFREASKMGLVDRESVWIIPESITNLLESDNKSALSYMEGALGIKTYYSERSSEYQDFEAQFRRIFWSRNPEEDNRYPGFYALQAYDSINXVTQAINRTTSRNSSTSNSKTLPREILSSSFKGLSGHIQFENGQLLQNPVLRIVNVVGKSHKELCFWTQQHGFTTTLHTGGKGGNLVAGNTECFRGVRWPGNLDRDPKGWNMPTKQNPLRIAVRSRTSFSXFVKVVYGQNKKPVEYKGFCIEIFEHVHRLLGYDLPYKYYPIDGTYNDLVQLVYNKSEESAWMFMKPFTWELWMVTVWYLEREPNPEFHGNWKSQLSTALWFTFSSLFFAHREKMHSNLTRVVMVSWLFLVLIVNSSYTASLSSMLTVKQLQPNVTDIQWLKRNNMKIGCDGDSFVRSFLEKVESFKPENIINITDEYKYDDAFTNNSIAAAFLELPYEKVFISEXCKRYTGSTPRTRFGGLGFMFQKGSPVARDVSKAILNLSEKAELKRLEEKWLITSQXCSNNVTSSNNMESLKLGSLWVLYVISGATSTICLLISTFQCLXSNQQHGEEVPLELEGNNNGTHSDERVWEKFITFAKQIYNKKGVTDADADTPKHPQQVASPEYLNEQSSN

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00071	98004	110408	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

cellular_component
GO:0016020 membrane

molecular_function
GO:0004970 ionotropic glutamate receptor activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000071s00005240.1	PF01094.23	ANF_receptor	63	380	6.90E-31
Glyur000071s00005240.1	PF00497.15	SBP_bac_3	477	792	1.00E-18
Glyur000071s00005240.1	PF00060.21	Lig_chan	573	823	6.70E-29
Glyur000071s00005240.1	PF01094.23	ANF_receptor	1043	1324	4.50E-30
Glyur000071s00005240.1	PF00060.21	Lig_chan	1472	1708	9.70E-24

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.218
SRR1783600	control	0.209
SRR1783602	moderate drought stress	0.499
SRR1811619	moderate drought stress	0.479

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.511
DRR006520	Root Summer glycyrrhizin high producing strain	0.394
DRR006521	Root Winter glycyrrhizin high producing strain	0.280
DRR006522	Root Winter glycyrrhizin high producing strain	0.292
DRR006523	Root Summer glycyrrhizin low producing strain	0.367
DRR006524	Root Summer glycyrrhizin low producing strain	0.311
DRR006525	Leaf Summer glycyrrhizin high producing strain	8.844
DRR006526	Leaf Summer glycyrrhizin high producing strain	9.085

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	0.670
SRR2868004	Drought Stress (root)	1.625
SRR2967015	Control (root)	0.743

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	32.807
SRR9715740	Leaf	25.350
SRR9715741	Leaf	42.182
SRR9715739	Root	0.117
SRR9715742	Root	0.958
SRR9715743	Root	0.675

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.178
SRR8749028	MeJA induced 9h	1.547
SRR8749029	MeJA induced 9h	1.472
SRR8749030	Uninduced	15.613
SRR8749031	Uninduced	8.263
SRR8749032	Uninduced	2.333

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	1.548
SRR8400027	Control - Root	1.174