Gene detail information of Glyur000071s00005235 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G33990.1 | 3.00E-65 | IQ-domain 9 |
| NR | XP_003546016.1 | 1.74E-147 | PREDICTED: protein IQ-DOMAIN 1 isoform X1 [Glycine max] |
| Swissprot | tr|Q9SF32|IQD1_ARATH | 7.00E-28 | Protein IQ-DOMAIN 1 |
| trEMBL | tr|K7MA97|K7MA97_SOYBN | 6.00E-148 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA15G08660.3} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00071 | 71404 | 75303 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 20.442 |
| SRR1783600 | control | 20.475 |
| SRR1783602 | moderate drought stress | 26.408 |
| SRR1811619 | moderate drought stress | 26.301 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 41.193 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 40.701 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 24.397 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 23.405 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 61.064 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 60.894 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 29.118 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 28.519 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 77.607 |
| SRR2868004 | Drought Stress (root) | 78.870 |
| SRR2967015 | Control (root) | 83.949 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 43.103 |
| SRR9715740 | Leaf | 31.944 |
| SRR9715741 | Leaf | 46.675 |
| SRR9715739 | Root | 6.512 |
| SRR9715742 | Root | 16.841 |
| SRR9715743 | Root | 16.689 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 18.420 |
| SRR8749028 | MeJA induced 9h | 28.937 |
| SRR8749029 | MeJA induced 9h | 19.936 |
| SRR8749030 | Uninduced | 27.568 |
| SRR8749031 | Uninduced | 50.316 |
| SRR8749032 | Uninduced | 27.418 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 75.050 |
| SRR8400027 | Control - Root | 77.909 |