Gene detail

Gene detail information of Glyur000071s00005232

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G28680.1	1.00E-163	HXXXD-type acyl-transferase family protein
NR	XP_004485871.1	0	PREDICTED: 3'-N-debenzoyl-2'-deoxytaxol N-benzoyltransferase-like [Cicer arietinum]
Swissprot	tr\|Q9M6E2\|DBAT_TAXCU	4.00E-56	10-deacetylbaccatin III 10-O-acetyltransferase
trEMBL	tr\|G7IK88\|G7IK88_MEDTR	0	3'-N-debenzoyl-2'-deoxytaxol benzoyltransferase {ECO:0000313\|EMBL:AES63970.2}

Sequence

Transcript Sequence

>Glyur000071s00005232.1
ACAATAGCCACTCACACAAAACAAGTGTAGCCAAACCATGGAAATGATGAAGAAAATTAGCACAGAGCGCACTCTCATTTACCCTTCTCACCCACCCTTCCTCCACGACCACGCCCTCCCTCTCTCCCACCTCGACACCGATCGTAACCTCAACCTCACCTTCCGCTACATTCGCGCTTACACCGCAACCGCCACAACCACCCACGACAACGACCCCTTCCACGTCATCTCTTCCTCCCTCTCAAAGGCTCTCCTCCACTACTACCCCCTCGCCGGCACGCTCCGCCACCGCCAGCACCCAGACCGCCGCCTCGAACTCTGGTGCGCCGCCGGACAGGGCGTCCCCCTCATCAGCTCCGCCGTGGACCTCACCCTCGACTCGGCGAACTATCTCGATGACCCGGCTTCACCTTTCGTCGAACAGTTGGTGCCCGACCCGGAACCCGAAGAGGGAATGGAGCACCCGTGCATGCTTCAGCTCACGGTGTTCAAGTGCGGCGGGTTCACTCTCGGTGCGGCCTTGCACCACTCGATGTGCGACGGGATTGGCGGGACTCTGTTTTTCAACGCGATGGCTGAGTTGGCTCGCGGGGCGACCCGGCTAACTGTGGAGCCCGTGTGGGACCGGGAGAGATTGTTGGGTCCCAGAGACCCGCCCCGTGTGGATTCCCCGTTGATAGGGGAATTTCTGGGTTTGGATAAGGGGTTTATGCCGTACAAGGAGGACATTGGTAAGGTTGTGAGAGAGTGTTTTCATGTAGAGGACGAGTGCTTAGACAAGTTCAAGAGGTCTTTGTTTGATCAATCTGGCTTCAACTTCACCACTTTTGAGACTCTCGGTGCCTACATATGGAGGTCCAAGATCAGGGCCACTGGAGTGGCGGTTCATGAGAAGGTGAAGTTTGCATACTCAATGAATATACGGAGAGTAGTAAAGCCATCACTGCATNCTGGCTACTGGGGCAATGGTTGTGTTCCCATGTATGTGCAGCTGAGTGTCAAAGATCTAATAGAGCAACCCCTTTGGGAAACAGCAGAGCTAATCAGAAAGAGTAAAAGCAATGTCAGTGATGAGTATGTTCACTCCTTCATCGATTATCAGCAGCTGCATTTTGCTGATGGGATCACGGCGGGAAAAAATGTGAGCGGGTTCACGGATTGGAGACACTTGGGCCATTCAACTGTGGACTTTGGGTGGGGTGGCCCAGTTACTGTTTTGCCACTTGGGAGAAACTTGCTTGGGAGTGTTGAGCCTTGTTTCTTTTTGCCTTATTCAACGGCCAGTGCAGAGAAGAAGGAGGGGTTCAAGGTTTTGGTGACTTTGACGGAGGCAGCGTTGCCTGCTTTCAGAGAAGACATGCAAGTGTTTGCCAGTAGCCAAGAGCAGTAGTGGAGCCACATATTGATGGGGTCTGAGCCACTGATTTGTTGTAATCAAACAAATAGAGATGTTAGATTTTGACAATATTAAATAGTGATGCGAAAAAAAGGTCCTTTTGGTTTGGTGGGAGGATTAAAAAATAAACAAACAAAAATTATCGTAAGGAATAACACTTTGGAAAGTTTCTT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00071	62544	65210	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

molecular_function
GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000071s00005232.1	PF02458.10	Transferase	9	442	6.70E-73

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.571
SRR1783600	control	0.608
SRR1783602	moderate drought stress	0.497
SRR1811619	moderate drought stress	0.526

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.689
DRR006520	Root Summer glycyrrhizin high producing strain	0.744
DRR006521	Root Winter glycyrrhizin high producing strain	0.070
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	0.774
DRR006524	Root Summer glycyrrhizin low producing strain	0.698
DRR006525	Leaf Summer glycyrrhizin high producing strain	9.169
DRR006526	Leaf Summer glycyrrhizin high producing strain	9.047

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	4.800
SRR2868004	Drought Stress (root)	4.056
SRR2967015	Control (root)	2.815

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	11.845
SRR9715740	Leaf	14.082
SRR9715741	Leaf	11.380
SRR9715739	Root	0.775
SRR9715742	Root	0.690
SRR9715743	Root	0.097

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.851
SRR8749028	MeJA induced 9h	1.624
SRR8749029	MeJA induced 9h	0.721
SRR8749030	Uninduced	0.000
SRR8749031	Uninduced	0.000
SRR8749032	Uninduced	0.084

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	1.829
SRR8400027	Control - Root	1.219