Gene detail information of Glyur000071s00005222


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G54960.10pyruvate decarboxylase-2
NRXP_003542972.10PREDICTED: pyruvate decarboxylase 1-like [Glycine max]
COGYP_007568556.12.00E-162Pyruvate decarboxylase [Legionella pneumophila subsp. pneumophila str. Philadelphia 1]
Swissprottr|P51850|PDC1_PEA0Pyruvate decarboxylase 1
trEMBLtr|I1M1V8|I1M1V8_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G30490.1}

Sequence

Transcript Sequence
Protein Sequence


Location information (JBrowse)

ScaffoldStartEndStrand
Scaffold000712711930903-


Gene family

Gene familysubfamily
----


KEGG pathway

KOEnzymeEnzyme IDpathwaymapID
K01568PDC, pdcEC:4.1.1.1Glycolysis / Gluconeogenesismap00010
Glycolysis / Gluconeogenesismap00010
Glycolysis / Gluconeogenesismap00010


Gene Ontology

molecular_function

GO:0000287  magnesium ion binding

GO:0003824  catalytic activity

GO:0030976  thiamine pyrophosphate binding



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000071s00005222.1PF02776.13TPP_enzyme_N281933.20E-35
Glyur000071s00005222.1PF00205.17TPP_enzyme_M2152935.30E-10
Glyur000071s00005222.1PF02775.16TPP_enzyme_C3875129.30E-16
Glyur000071s00005222.2PF00205.17TPP_enzyme_M2741.50E-08
Glyur000071s00005222.2PF02775.16TPP_enzyme_C1672923.20E-16
Glyur000071s00005222.3PF02776.13TPP_enzyme_N281933.40E-36


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control117.865
SRR1783600control117.752
SRR1783602moderate drought stress94.760
SRR1811619moderate drought stress94.556

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain91.509
DRR006520Root Summer glycyrrhizin high producing strain90.113
DRR006521Root Winter glycyrrhizin high producing strain252.098
DRR006522Root Winter glycyrrhizin high producing strain244.383
DRR006523Root Summer glycyrrhizin low producing strain155.805
DRR006524Root Summer glycyrrhizin low producing strain154.374
DRR006525Leaf Summer glycyrrhizin high producing strain41.344
DRR006526Leaf Summer glycyrrhizin high producing strain39.986

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress (root)134.277
SRR2868004Drought Stress (root)170.484
SRR2967015Control (root)162.025

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leaf63.602
SRR9715740Leaf64.526
SRR9715741Leaf54.996
SRR9715739Root177.888
SRR9715742Root118.561
SRR9715743Root113.250

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h765.870
SRR8749028MeJA induced 9h2256.421
SRR8749029MeJA induced 9h2252.588
SRR8749030Uninduced812.905
SRR8749031Uninduced1270.610
SRR8749032Uninduced1692.780

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment - Root145.739
SRR8400027Control - Root132.322

© 2021 Resource Institute for Chinese & Ethnic Materia Medica, Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved