Gene detail information of Glyur000070s00008095 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G01680.1 | 2.00E-143 | |
| NR | KEH20741.1 | 0 | sieve element occlusion protein [Medicago truncatula] |
| trEMBL | tr|A0A072TU76|A0A072TU76_MEDTR | 0 | Sieve element occlusion protein {ECO:0000313|EMBL:KEH20741.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00070 | 408025 | 411489 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000070s00008095.1 | PF14576.1 | SEO_N | 48 | 202 | 2.00E-56 |
| Glyur000070s00008095.1 | PF14576.1 | SEO_N | 203 | 251 | 1.30E-08 |
| Glyur000070s00008095.1 | PF14577.1 | SEO_C | 416 | 648 | 4.40E-98 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.389 |
| SRR1783600 | control | 0.384 |
| SRR1783602 | moderate drought stress | 1.112 |
| SRR1811619 | moderate drought stress | 1.097 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.255 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.187 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.109 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.077 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.832 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.773 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.622 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.780 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.595 |
| SRR2868004 | Drought Stress (root) | 1.943 |
| SRR2967015 | Control (root) | 2.277 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.931 |
| SRR9715740 | Leaf | 1.287 |
| SRR9715741 | Leaf | 3.693 |
| SRR9715739 | Root | 0.235 |
| SRR9715742 | Root | 3.344 |
| SRR9715743 | Root | 2.516 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.001 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.062 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.070 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.607 |
| SRR8400027 | Control - Root | 2.514 |