Gene detail information of Glyur000070s00008087 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G24480.1 | 2.00E-90 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
| NR | KEH20730.1 | 2.41E-144 | methyltransferase domain protein [Medicago truncatula] |
| COG | YP_005066422.1 | 5.00E-08 | TPR domain protein [Arthrospira platensis NIES-39] |
| trEMBL | tr|A0A072U4H3|A0A072U4H3_MEDTR | 9.00E-145 | Methyltransferase domain protein {ECO:0000313|EMBL:KEH20730.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00070 | 374735 | 375487 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000070s00008087.1 | PF08241.7 | Methyltransf_11 | 109 | 189 | 3.60E-09 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.751 |
| SRR1783600 | control | 1.837 |
| SRR1783602 | moderate drought stress | 2.663 |
| SRR1811619 | moderate drought stress | 2.616 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 11.391 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 10.998 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.233 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.788 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.420 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.369 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.411 |
| SRR2868004 | Drought Stress (root) | 5.493 |
| SRR2967015 | Control (root) | 7.582 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.487 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.219 |
| SRR9715739 | Root | 2.168 |
| SRR9715742 | Root | 3.181 |
| SRR9715743 | Root | 1.155 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.094 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.081 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.003 |
| SRR8749032 | Uninduced | 0.038 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.401 |
| SRR8400027 | Control - Root | 9.226 |