Gene detail

Gene detail information of Glyur000070s00008083

Functional Annotation

Database	Orthologs	Annotation
TAIR	AT5G54830.1	DOMON domain-containing protein / dopamine beta-monooxygenase N-terminal domain-containing protein
NR	XP_003532804.1	PREDICTED: uncharacterized protein LOC100816185 [Glycine max]
Swissprot	tr\|Q9FFU6\|B561A_ARATH	Cytochrome b561, DM13 and DOMON domain-containing protein At5g54830 (Precursor)
trEMBL	tr\|K7L6C8\|K7L6C8_SOYBN	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA08G13721.2}

Sequence

Transcript Sequence

>Glyur000070s00008083.1
ATGCTTCGCAGATTCGTCTTCCTATGGTTCCTCCTCCACTCCTCGTTCTTCTCCGGGCACGCGGATCCTGTTCCGAACTGCAGCCGGGTCAGCCCGGTCGTAAATTCGGAGTCAGAGTTCACAATGGTTCAACACCAGCTCCGAGGCTCCCTGAAAATCACCGACGATTGCTCCTTTAGGGTTTCCCAGTTCGACATGCTCTCCGGTGCCGATGTGCACTGGTGGGGTGCGCCCGCTCCTGATTTCGAAAACCTCACGAGTGGATTCATCGTCTCGGATCACAAACTGAACCAAACCTATAAGAACTCAAGCTTCGCGGTTCGCTTGATGAGCAACGTCACGTGGAGCATGATCCATGTCCTCGCCGTGTGGGATCGCGCCACCGCCTCCGATTTCGGGCACGTCGTGCTGGGGAAAAATGCGACTACGACGGCGACGACGACGAGGCTTCCGACGGTGTTTGAGAATTGCAAGGTTTTGTCGAAGGATTTTAGGGTGAGGTGGAGTTTGAACGTGNAGGAGGATTCCATTGAAATTGGGCTTGAGGCTGCAACTGGGATCATGAATTACATGGCGTTTGGGTGGGCGAATTCGAGTGGTGGTGATAATTCTGAGCTCATGTTAGGGGCTGATGTGGCTGTGGCAGGGTTTAAGGAGGATGGTTTGCCCTTTGTGGGTGATTTCTTCATTACCAAGTATAGTGAGTGTGTGAGAAACAGTGATGGTTTGGCTCAGGGGGTTTGTCCTGATTCCATTTATGAGGAGGAGAATCAGGATAAGGTGGGTTTGGTGAACAATACGGTGTTGATTTATGGGCATAGGAAGGATGGGGTGTCGTTTGTTAGATATAGGAGACACTTGAATAAGGTTGATGGCAAGTATGATCACCCTGTGAACCATTCAGCAAATATGAAGGTTATTTGGGCTTTGGGGCGAATTAAACCCCCTGATACTATTATTCCTTATTATCTCCCTCAGAATCATGGAGGTTTTCCTTTGGAGACTTATGGNCATTTGGTTCTGAATGTCTCGGAGCATGTGAATGAGTGTACAGGTCCCTTGGATGCTGAGGAGAAGGAGGATCAAGATCTCATCATTGCAGATGCAAAAGTCCCGTTGGTGGTTTCGTCNGGTTCTGCAATACATTACCCGAACCCTCCAAATCCGGAAAGGGTTCTTTACATCAACAAAAAGGAAGCTCCTGTGTTGAGAGTGGAAAGAGGGGTGCCAGTCAAGTTTTCCATTCAAGCCGGGCATGATGTTGCGCTTTATGTTACTTCGGATCCGGTTGGTGGAAATGCTACGATGAGGAACCTGACNGAGACTATTTATGCTGGAGGTCCGGAGGCCCAAGGGGTTCAAGCCAGTCCCACTGAATTGGTTTGGACTCCTGACAGGAACACTCCTGACCACATCTACTATCATTCATTGTACAAGCAGAAAATGGGTTGGAAGGTCGAGGTGGTTGACGGGGGTCTATCAGACATGTATAATAATAGTGTTGTTCTGAATGATCAACAGGTTACCTTCTTTTGGACATTGTCAAAGGATTCTATATCTATTGCAGCTCGTGGTGAGAAAAAAAGTCGTTATCTTGCAATAGGACTTGGAAGTGGAATGGTAAACAGTTATGCTTATGTAGGTTGGATTGATGATAGTGGTATAGGTCATGTAAACACTTACTGGATTGATGGAAAGGATGCTTCAAGCATACATCCTACACATGAGAATTTGACATATGTAAGATGTAAAACAGAAAATGGCATCATTACTTTGGAGTTTACACGTCCCTTGAACCCATCTTGTAGCCGGGGAAGTAGGCCAGAATGTAACAATATTATTGATCCCACAACACCACTTAAAGTTGTTTGGGCAATGGGTGCCAAATGGACGAATGACCATCTTAGTGATAGGAATATGCATTCTAGTATGAGTAATAGACCTTTCAATGTACTGCTGGTGCGTGGTTCTGCAGAAGCAGAGCAAGATTTACTTCCGGTTTTGGCTGTGCACGGCTTTATGATGTTTCTTGCATGGGGTATCCTGCTTCCTGGAGGGATATTGGCAGCCAGATACTTAAAACATCTAAAAGGTGATGGATGGTACCGGATTCATGTTTACTTGCAATACTCAGGGTTAGCAATTGTTCTACTTGCCCTTCTGTTTGCTGTAGCGGAGCTTGGGGGATTTTATGTCAGCTCAGCACATGTTAAATTTGGATTTACTGCAATTTTTTTGGCTTGTATACAGCCAGTAAATGCTTTCCTGAGACCNCAGAAACCAAGAAATGGGGAGCAGGCACCCTTCAAAAGGGTTATTTGGGAATATTTCCACATAATTGTTGGTAGATGTGCAATTGTTGTTGGAATTGCTGCACTTTTTAGCGGGATGAAGCATCTAGGAGACAGATATGATGTGGAAAATGTCCATAGACTCAGTTGGGCTTTGGCAATTTGGTTTTTAATTGGTGTATTGATTGTTATTTATATGGAATACCATGAAAGGCAACNAAAAAGGGACCGGATATCTGGAAGAAGCAATTGGGTGCTTGGTAATCTTGAGGAAGATGATTCAGTTGATCTCTTGGGCACAACCACGACACTTGCAGATAAAGAGTCGCAACCCTCTATTCTGTCATTATTGACTGCCTTGGTAGTTAGACTTCTGGTGGAGCTTTTACAGAAAGGACGTGAAGCTCAGGCCCTTGGCGGTGGTAAAGCTGAAGAGATTCTAGCACTCTTGGTTTCAACAACTTTACAGGTTTTTGCCTGGATCACAAGTTGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00070	339400	343351	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

cellular_component
GO:0016021 integral component of membrane

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000070s00008083.1	PF10517.4	DM13	40	137	1.20E-12
Glyur000070s00008083.1	PF03351.12	DOMON	161	311	1.10E-11
Glyur000070s00008083.1	PF03351.12	DOMON	505	627	1.20E-26

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	4.432
SRR1783600	control	4.483
SRR1783602	moderate drought stress	4.137
SRR1811619	moderate drought stress	4.223

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	10.883
DRR006520	Root Summer glycyrrhizin high producing strain	10.612
DRR006521	Root Winter glycyrrhizin high producing strain	2.856
DRR006522	Root Winter glycyrrhizin high producing strain	2.743
DRR006523	Root Summer glycyrrhizin low producing strain	10.929
DRR006524	Root Summer glycyrrhizin low producing strain	10.883
DRR006525	Leaf Summer glycyrrhizin high producing strain	3.447
DRR006526	Leaf Summer glycyrrhizin high producing strain	3.566

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	7.624
SRR2868004	Drought Stress (root)	8.735
SRR2967015	Control (root)	13.663

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	11.492
SRR9715740	Leaf	9.594
SRR9715741	Leaf	12.781
SRR9715739	Root	10.998
SRR9715742	Root	31.784
SRR9715743	Root	28.549

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	10.875
SRR8749028	MeJA induced 9h	8.527
SRR8749029	MeJA induced 9h	7.177
SRR8749030	Uninduced	4.484
SRR8749031	Uninduced	8.428
SRR8749032	Uninduced	7.414

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	5.631
SRR8400027	Control - Root	7.575