Gene detail information of Glyur000070s00008061 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G02850.1 | 8.00E-39 | plantacyanin |
| NR | XP_003629993.1 | 1.62E-77 | Basic blue protein [Medicago truncatula] |
| Swissprot | tr|P00303|BABL_CUCSA | 5.00E-49 | Basic blue protein |
| trEMBL | tr|G7L9J5|G7L9J5_MEDTR | 6.00E-78 | Basic blue-like protein {ECO:0000313|EMBL:AET04469.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00070 | 187511 | 188952 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000070s00008061.1 | PF02298.12 | Cu_bind_like | 38 | 115 | 6.30E-26 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 15.691 |
| SRR1783600 | control | 15.854 |
| SRR1783602 | moderate drought stress | 13.998 |
| SRR1811619 | moderate drought stress | 13.910 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.119 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.734 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 153.857 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 150.321 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.556 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.565 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.256 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.251 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 19.425 |
| SRR2868004 | Drought Stress (root) | 45.860 |
| SRR2967015 | Control (root) | 14.540 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 108.375 |
| SRR9715740 | Leaf | 13.565 |
| SRR9715741 | Leaf | 42.795 |
| SRR9715739 | Root | 52.951 |
| SRR9715742 | Root | 101.279 |
| SRR9715743 | Root | 90.284 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 721.584 |
| SRR8749028 | MeJA induced 9h | 114.033 |
| SRR8749029 | MeJA induced 9h | 240.982 |
| SRR8749030 | Uninduced | 7.268 |
| SRR8749031 | Uninduced | 3.452 |
| SRR8749032 | Uninduced | 21.344 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 43.671 |
| SRR8400027 | Control - Root | 34.283 |