Gene detail information of Glyur000070s00008060 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G02850.1 | 2.00E-41 | plantacyanin |
| NR | AFK36389.1 | 2.70E-68 | unknown [Lotus japonicus] |
| Swissprot | tr|Q8LG89|BABL_ARATH | 6.00E-52 | Basic blue protein (Precursor) |
| trEMBL | tr|I3S7Z7|I3S7Z7_LOTJA | 1.00E-68 | Uncharacterized protein {ECO:0000313|EMBL:AFK36389.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00070 | 175870 | 177198 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000070s00008060.1 | PF02298.12 | Cu_bind_like | 41 | 116 | 3.90E-27 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.507 |
| SRR1783600 | control | 6.258 |
| SRR1783602 | moderate drought stress | 4.547 |
| SRR1811619 | moderate drought stress | 4.119 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 91.148 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 89.678 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 32.711 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 31.548 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.380 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.380 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 99.221 |
| SRR2868004 | Drought Stress (root) | 144.604 |
| SRR2967015 | Control (root) | 35.001 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.166 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.202 |
| SRR9715739 | Root | 9.321 |
| SRR9715742 | Root | 27.453 |
| SRR9715743 | Root | 27.631 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.118 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 36.861 |
| SRR8400027 | Control - Root | 61.268 |