Gene detail information of Glyur000070s00008044 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G28680.1 | 4.00E-64 | RmlC-like cupins superfamily protein |
| NR | KHN06498.1 | 6.91E-157 | Glutelin type-A 2 [Glycine soja] |
| Swissprot | tr|P07730|GLUA2_ORYSJ | 1.00E-23 | Glutelin type-A 2 basic chain (Precursor) |
| trEMBL | tr|I1K4A8|I1K4A8_SOYBN | 5.00E-157 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA05G30290.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00070 | 100236 | 102798 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000070s00008044.1 | PF00190.17 | Cupin_1 | 8 | 62 | 1.20E-07 |
| Glyur000070s00008044.1 | PF00190.17 | Cupin_1 | 121 | 264 | 6.80E-13 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 55.565 |
| SRR1783600 | control | 54.337 |
| SRR1783602 | moderate drought stress | 83.991 |
| SRR1811619 | moderate drought stress | 81.635 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 32.648 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 33.033 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 11.627 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 12.417 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 101.726 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 100.894 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.392 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.348 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 78.452 |
| SRR2868004 | Drought Stress (root) | 86.367 |
| SRR2967015 | Control (root) | 160.063 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 6.764 |
| SRR9715740 | Leaf | 1.677 |
| SRR9715741 | Leaf | 3.605 |
| SRR9715739 | Root | 8.635 |
| SRR9715742 | Root | 194.412 |
| SRR9715743 | Root | 160.828 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.074 |
| SRR8749028 | MeJA induced 9h | 1.825 |
| SRR8749029 | MeJA induced 9h | 3.671 |
| SRR8749030 | Uninduced | 2.155 |
| SRR8749031 | Uninduced | 5.555 |
| SRR8749032 | Uninduced | 1.477 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 78.294 |
| SRR8400027 | Control - Root | 97.602 |