Gene detail information of Glyur000069s00004093 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G05350.1 | 0 | Metallopeptidase M24 family protein |
| NR | XP_003554659.1 | 0 | PREDICTED: probable Xaa-Pro aminopeptidase P isoform X1 [Glycine max] |
| COG | YP_004899742.1 | 2.00E-132 | Xaa-Pro aminopeptidase [Pelagibacterium halotolerans B2] |
| trEMBL | tr|G7KYN6|G7KYN6_MEDTR | 0 | Xaa-pro aminopeptidase P {ECO:0000313|EMBL:AES82504.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00069 | 403266 | 409471 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000069s00004093.1 | PF01321.13 | Creatinase_N | 91 | 205 | 1.60E-05 |
| Glyur000069s00004093.1 | PF00557.19 | Peptidase_M24 | 410 | 625 | 1.30E-38 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 7.587 |
| SRR1783600 | control | 7.665 |
| SRR1783602 | moderate drought stress | 9.559 |
| SRR1811619 | moderate drought stress | 9.738 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 9.137 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 8.944 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 6.959 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6.910 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.928 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.163 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 15.986 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 15.988 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 9.138 |
| SRR2868004 | Drought Stress (root) | 10.145 |
| SRR2967015 | Control (root) | 11.541 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 13.156 |
| SRR9715740 | Leaf | 22.024 |
| SRR9715741 | Leaf | 16.347 |
| SRR9715739 | Root | 2.117 |
| SRR9715742 | Root | 5.759 |
| SRR9715743 | Root | 5.074 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.976 |
| SRR8749028 | MeJA induced 9h | 1.441 |
| SRR8749029 | MeJA induced 9h | 0.463 |
| SRR8749030 | Uninduced | 0.533 |
| SRR8749031 | Uninduced | 0.362 |
| SRR8749032 | Uninduced | 0.369 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 11.224 |
| SRR8400027 | Control - Root | 11.333 |