Gene detail information of Glyur000069s00004091 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G05330.1 | 1.00E-73 | cyclin family |
| NR | XP_003626289.1 | 1.08E-168 | Microtubule binding protein [Medicago truncatula] |
| Swissprot | tr|Q197W8|TANA_ARATH | 8.00E-102 | Microtubule-binding protein TANGLED |
| trEMBL | tr|G7KYN9|G7KYN9_MEDTR | 4.00E-169 | Cyclin family protein, putative {ECO:0000313|EMBL:AES82507.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00069 | 394861 | 396456 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.287 |
| SRR1783600 | control | 1.330 |
| SRR1783602 | moderate drought stress | 1.139 |
| SRR1811619 | moderate drought stress | 1.067 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.138 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.062 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.859 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.887 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.297 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.279 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 5.373 |
| SRR2868004 | Drought Stress (root) | 2.315 |
| SRR2967015 | Control (root) | 3.838 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.428 |
| SRR9715743 | Root | 0.247 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 14.432 |
| SRR8749028 | MeJA induced 9h | 7.818 |
| SRR8749029 | MeJA induced 9h | 10.202 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.186 |
| SRR8749032 | Uninduced | 0.291 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.022 |
| SRR8400027 | Control - Root | 2.326 |