Gene detail information of Glyur000069s00004062 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G30996.1 | 1.00E-16 | Protein of unknown function (DUF1068) |
| NR | XP_007147081.1 | 3.82E-85 | hypothetical protein PHAVU_006G094800g [Phaseolus vulgaris] |
| trEMBL | tr|V7BPV4|V7BPV4_PHAVU | 1.00E-85 | Uncharacterized protein {ECO:0000313|EMBL:ESW19075.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00069 | 225544 | 227419 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000069s00004062.1 | PF06364.7 | DUF1068 | 19 | 170 | 1.80E-37 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 13.674 |
| SRR1783600 | control | 13.943 |
| SRR1783602 | moderate drought stress | 22.798 |
| SRR1811619 | moderate drought stress | 22.438 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 9.157 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 9.088 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.039 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.688 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 7.050 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 7.171 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.558 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.560 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 10.771 |
| SRR2868004 | Drought Stress (root) | 8.001 |
| SRR2967015 | Control (root) | 13.133 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.392 |
| SRR9715740 | Leaf | 1.842 |
| SRR9715741 | Leaf | 2.075 |
| SRR9715739 | Root | 2.152 |
| SRR9715742 | Root | 6.156 |
| SRR9715743 | Root | 4.933 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.317 |
| SRR8749028 | MeJA induced 9h | 1.705 |
| SRR8749029 | MeJA induced 9h | 0.923 |
| SRR8749030 | Uninduced | 0.109 |
| SRR8749031 | Uninduced | 0.200 |
| SRR8749032 | Uninduced | 0.366 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 22.985 |
| SRR8400027 | Control - Root | 20.848 |