Gene detail information of Glyur000069s00004061 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G53880.1 | 2.00E-18 | Eukaryotic translation initiation factor 2B (eIF-2B) family protein |
| NR | ACU20496.1 | 9.52E-40 | unknown [Glycine max] |
| Swissprot | tr|Q9LUM1|LOR11_ARATH | 5.00E-22 | Protein LURP-one-related 11 |
| trEMBL | tr|I1KP87|I1KP87_SOYBN | 3.00E-40 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G01620.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00069 | 223031 | 223445 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000069s00004061.1 | PF04525.7 | Tub_2 | 14 | 78 | 1.00E-18 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.067 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.023 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.390 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.581 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.873 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.167 |
| SRR2868004 | Drought Stress (root) | 8.855 |
| SRR2967015 | Control (root) | 11.097 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.415 |
| SRR9715740 | Leaf | 1.896 |
| SRR9715741 | Leaf | 0.591 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.104 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.752 |
| SRR8749028 | MeJA induced 9h | 5.762 |
| SRR8749029 | MeJA induced 9h | 0.234 |
| SRR8749030 | Uninduced | 1.520 |
| SRR8749031 | Uninduced | 14.154 |
| SRR8749032 | Uninduced | 16.665 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.177 |
| SRR8400027 | Control - Root | 0.184 |