Gene detail

Gene detail information of Glyur000069s00004057

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G54730.2	2.00E-74	Major facilitator superfamily protein
NR	XP_003520821.1	5.39E-149	PREDICTED: sugar transporter ERD6-like 5-like [Glycine max]
COG	YP_003737656.1	4.00E-27	sugar transporter [Halalkalicoccus jeotgali B3]
Swissprot	tr\|Q3ECP7\|ERDL5_ARATH	8.00E-105	Sugar transporter ERD6-like 5
trEMBL	tr\|I1JRG3\|I1JRG3_SOYBN	2.00E-149	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA03G40100.1}

Sequence

Transcript Sequence

>Glyur000069s00004057.1
ATGGACAGTAAAATCACAGAAGCAAGCNAGATTTCAAGTCCTCTGCTTCCCGGTGAGGGAAAGAGGCATAGCGGATCTTGTTCGGTACCAAGTATCCTTATACTTAGCACCCTTGTTGCTGTTTCTGGTTCTTACGTGGGGTATTCATCCCCTGCTCAATCTGGAATCATGGATGACCTCAATCTCGGTGTGGCCCAGTATTCACTGTTTGGTTCAATACTAACAATTGGAGCAATGATTGGTGCCATTATAAGTGGTAGTGTAGCAGATTATGCGGGTCGTCGAGTTGTAGGCCATGGGCTTCTCCGAGGTTGCTTGGTGGCTTTATGTTGGAAGACTGTTGGTAGGATGTGGGATGGGCATTCTATCTTATGTGGCACTGTTCCGTGTCTTGCACAGCTTCTGAGTCTATCCTTCATTCCTGAGTCTCCAAGGTGGCTGGCAAAGGTTGGTCACCCGGAAAGGAGTGAATCTGCTTTACAGCGCCTTAGGGGAAAGNATGCTGATGTTTCTCAAGAGGCCACTGAAATTAGAGGATTTACAGAAGCCCTTCAGCGGCTTAAAGAAGCTAGCATTGTTGTATTTGAAGTCACTCAGTGTGAGCTTTCTAAGATAGACCCATTCATGAATCCTGTTTCTAACTTTTTCCAGATTCTTATGGTAGGAGTTGGCTTGATAATACTACAACAGTTTGGAGGGGTTAATGGCATTGTTTTCTACGCAAATTCTATATTTATTTCTGCTGGGTTTTCCAGAAGCATTGGAACAATAGCAATGGTTACTGTTCAGATCCCAATGACAGCTTTGGGAGTAATTTTGTTGGATAAATCTGGAAGACGGCCACTTTTACTGATCTCTGCACTGGGAACATGCTTAGGATGCTTCCTTACAGCCCTATCATTCTTCTTGCAGGACTTGCATAAATGGAAGGAAGTCAGTCCCATTCTGGCACTCATTGGTGTACTGGTATATACGGGATCTTTCTCGCTTGGCATGGGAGGAATTCCCTGGGTTATAATGTCTGAGATATTTCCCATTAACGTGAAGGGCTCTGCTGGAAGCTTTGTAACATTGGAACTTTCTTCATGTTCGCTGGCATATGTGGCTTCACTGTCCTATTCGTAGCAAAACTAGTTCCGGAGACCAAGGGGCGCNCACTAGAAGAAATTCAAGCTTCTTTGAATTCGTATTCAACAAAGGGATGTACTTAAACCCAATGTCGCCGCCATGGGGCAGTTTACGCTCCGCATATGAATTTGCAAGTATGCTAACTTTGTTTGACGAAATATTTTGTTAGTACATATGAAAATAAAGAGAAAATAACTCCTANTAATCTCCTCTATCTTGTAAAAANAAAATAAAAATAATCTCCTATTTAAAACCTTATCATCATTTACGATTTCTTCTTTATTGAATAGTATTTATCCATTCCGTTGGAGTAGGAGTAAGAACAAACGTGTGCCGTG

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00069	183805	187724	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0055085 transmembrane transport

cellular_component

GO:0016020 membrane

GO:0016021 integral component of membrane

molecular_function

GO:0022857 transmembrane transporter activity

GO:0022891 substrate-specific transmembrane transporter activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000069s00004057.1	PF00083.19	Sugar_tr	122	357	1.30E-42

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	1.674
SRR1783600	control	1.913
SRR1783602	moderate drought stress	2.846
SRR1811619	moderate drought stress	2.945

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	2.958
DRR006520	Root Summer glycyrrhizin high producing strain	2.700
DRR006521	Root Winter glycyrrhizin high producing strain	4.353
DRR006522	Root Winter glycyrrhizin high producing strain	4.549
DRR006523	Root Summer glycyrrhizin low producing strain	2.318
DRR006524	Root Summer glycyrrhizin low producing strain	2.863
DRR006525	Leaf Summer glycyrrhizin high producing strain	13.821
DRR006526	Leaf Summer glycyrrhizin high producing strain	13.381

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	2.280
SRR2868004	Drought Stress (root)	3.888
SRR2967015	Control (root)	4.046

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	7.852
SRR9715740	Leaf	10.583
SRR9715741	Leaf	7.838
SRR9715739	Root	0.813
SRR9715742	Root	2.560
SRR9715743	Root	2.751

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.012
SRR8749028	MeJA induced 9h	0.009
SRR8749029	MeJA induced 9h	0.013
SRR8749030	Uninduced	0.090
SRR8749031	Uninduced	0.163
SRR8749032	Uninduced	0.225

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	3.019
SRR8400027	Control - Root	3.334