Gene detail information of Glyur000069s00004049 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G27290.1 | 7.00E-134 | |
| NR | ABN08173.1 | 0 | Peptidase, cysteine peptidase active site [Medicago truncatula] |
| COG | YP_007157646.1 | 6.00E-30 | hypothetical protein Anacy_3332 [Anabaena cylindrica PCC 7122] |
| trEMBL | tr|A2Q3H3|A2Q3H3_MEDTR | 0 | Stress regulated protein {ECO:0000313|EMBL:AES82561.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00069 | 145740 | 148920 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.177 |
| SRR1783600 | control | 1.236 |
| SRR1783602 | moderate drought stress | 1.989 |
| SRR1811619 | moderate drought stress | 1.945 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.677 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.537 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.952 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.937 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.629 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.676 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 21.911 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 21.402 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.580 |
| SRR2868004 | Drought Stress (root) | 5.281 |
| SRR2967015 | Control (root) | 5.360 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 27.619 |
| SRR9715740 | Leaf | 39.871 |
| SRR9715741 | Leaf | 29.214 |
| SRR9715739 | Root | 1.695 |
| SRR9715742 | Root | 1.960 |
| SRR9715743 | Root | 1.454 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.262 |
| SRR8749028 | MeJA induced 9h | 1.728 |
| SRR8749029 | MeJA induced 9h | 1.680 |
| SRR8749030 | Uninduced | 1.948 |
| SRR8749031 | Uninduced | 1.464 |
| SRR8749032 | Uninduced | 1.315 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 7.801 |
| SRR8400027 | Control - Root | 6.490 |