Gene detail information of Glyur000069s00004031 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | CDO98918.1 | 4.02E-08 | unnamed protein product [Coffea canephora] |
| trEMBL | tr|A0A068TU90|A0A068TU90_COFCA | 2.00E-08 | Coffea canephora DH200=94 genomic scaffold, scaffold_3 {ECO:0000313|EMBL:CDO98918.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00069 | 45972 | 47434 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.105 |
| SRR1783600 | control | 0.103 |
| SRR1783602 | moderate drought stress | 0.218 |
| SRR1811619 | moderate drought stress | 0.213 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.154 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.155 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.321 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.157 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.159 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 27.766 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 27.651 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.547 |
| SRR2868004 | Drought Stress (root) | 0.212 |
| SRR2967015 | Control (root) | 0.266 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 101.522 |
| SRR9715740 | Leaf | 26.889 |
| SRR9715741 | Leaf | 29.806 |
| SRR9715739 | Root | 0.071 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.749 |
| SRR8749028 | MeJA induced 9h | 0.236 |
| SRR8749029 | MeJA induced 9h | 0.143 |
| SRR8749030 | Uninduced | 0.137 |
| SRR8749031 | Uninduced | 0.055 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.446 |
| SRR8400027 | Control - Root | 0.408 |