Gene detail

Gene detail information of Glyur000069s00004028.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G54610.3	0	Protein kinase superfamily protein
NR	KHN04043.1	0	Putative serine/threonine-protein kinase [Glycine soja]
COG	YP_003371239.1	1.00E-23	serine/threonine protein kinase [Pirellula staleyi DSM 6068]
Swissprot	tr\|Q9ZVM9\|Y1461_ARATH	0	Probable serine/threonine-protein kinase At1g54610
trEMBL	tr\|I1JRJ5\|I1JRJ5_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA03G40330.1}

Sequence

Transcript Sequence

>Glyur000069s00004028.1
GAGTTTGTTTGCGGTTTGACTTAACCTGAGAAAAGGAGAGTGGGAAGAAGATCTCATCCTTCTNTATATTCCTTTTCTTCTTGTCTGAGACCAAAAGTCCAAACACTACACAAGCCAACAAACAACCACTCTCTATTGAGACAAGACAGACACCCCCCATCCCNTCTTTATATTATTATTTTTATTTTTATAGCAACTGAATGAACTCTCTCTGCTTCAAATTTACTGTTACTATCACTGAATCCTGCCTGGTACTGAGTGAAATTCTAAAAGTTAGTGGTTCTCTCTTTATGCTCGTAGGTCGACTGNGCTACTAAGAAGCTGTAATTGACGAGTTTGGTTTTGAATCTTTTGATTTCGATTTCAAAGTGAAATTGAAACTCAAATCCGTTNTCGTATAAGGATAGTAAAGTAGACTAGAGCCGCATTCATCTCGTTATCGATGCTTTTAATTGGATTAATTGATGCGGTAATTGTTTGGTGATTAGGAACTAGAAAAGCATGTGTAAGAGATGAAGCATAGATTTAAGAAATGGGATGTGTGATTAGCCGCGAAGCTTCCTCGGGGATAATCTCGGAGGAGAAGAGTGTGGGCGGTGAAAGTAAGAGGAAGGTTGATGGAGCCTCGAGTATAGGTGAGGGGAAGGCGGTGGTAGAGGTTGAGAATGGTAAAAAGGAGAAGGTGGAGAAGGAGAAGGGTGGTGGTGGTGATGGGGTTCAGCGGCCTCGGGGGGAAAGAAGAAGATCAAAGGCGAATCCGAGACTAAGTAACCCGCCAAAGCATTTGCGGGGGGAACAGGTTGCGGCTGGGTGGCCGCCGTGGCTCACCGCTGTGTGTGGGGAAGCTCTCAGTGGCTGGGTTCCTCGAAAGGCTGACACCTTTGAGAAAATTGATAAGATTGGGCAAGGAACTTATAGTAATGTGTACAAAGCTAAAGACACTTTGACGGGTAAAATTGTTGCTCTAAAGAAGGTTCGATTTGACAATTTGGAACCCGAGAGCGTTAAATTCATGGCTAGAGAGATTCTTATCCTGCGAAGATTGGATCATCCCAATGTTATTAAGTTGCAGGGTTTAGTTACATCAAGGATGTCCTGTAGTTTGTATTTGGTGTTCGATTACATGGAGCATGATTTAGCTGGACTCGCTGCAAGCCCAGGAATCAGGTTCACAGAGCCTCAGATAAAATGTTACATGCATCAGCTGCTATCAGGACTTGAGCACTGTCATAACCGTCATGTACTTCACCGTGATATTAAAGGATCAAATCTTCTCATTGACAATGAAGGAATACTTAAGATTGCTGACTTTGGACTGGCATCTTTTTTTGATCCAAACCATAGACANCCCATGACTAGTCGTGTAGTAACACTTTGGTATCGGCCTCCTGAGTTGCTTCTTGGTGCCACAGATTATGGTGCGGGCATAGACCTTTGGAGTGCTGGATGTATTTTAGGAGAGTTATTGGCTGGGAAGCCAATTATGCCTGGTCGCACAGAGGTGGAGCAACTGCATAAGATATACAAACTATGTGGTTCACCTTCTGATGAGTACTGGAAGAAGTCAAAGTTGCCTAATGCTACCTTGTTTAAACCTCGAGAGCCATACAAGCGATGCATAAGAGAGACATTTAAAGATTTTCCACCTTCTGCTCTATCCCTTATTGATACTCTTCTTGCAATTGATCCTGTAGAACGGAAAACTTCCTCAGATGCTTTAAGAAGTGAGTTCTTTACCACAGAACCTTATGCTTGCNATCCTTCTAGCCTTCCAAAATACCCCCCAAGCAAAGAAATGGACGCTAAACGACGGGATGATGAAATGAGGAGACTAAGAGCTGCAAGCAAAGCTCATGTTGATGGTCCAAAGAAGCATCGTACACGTGATCGTGCTGTGAAAGCTATTCCTGCTCCCGAAGCCAATGCAGAGCTTCAATCCAATATTGATAGAAGACGTCTAATCACTCATGCAAATGCTAAGAGCAAGAGTGAGAAGTTCCCTCCACCACATCAAGATGGACAACTTGGCTTTCCTTTGGGATCTTCACATCATATTGATCCAGATACTGTTCCTACNGATGTCTCTTTCACTACAACCTCATATACCTATTCAAAAGAACCATTCCAAGCTTGGTCAGGTCCAATTGGTAACGCTGCTGATATTGGAGTGCCAAAGCGGAAGAAACACACTTCAGGTGATGCACTGGATTTATCAAAACCACAGAAAGGTGCTCCCAAGGATAAGTCTAAAGGGAAGAAAATCATAGCTTAGATATTTAGTACATTCTTATACCGTCAATTATGATAAAAATAATTTG

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00069	29228	34318	+

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:4.5.2

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function

GO:0004672 protein kinase activity

GO:0005524 ATP binding

GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000069s00004028.1	PF00069.20	Pkinase	117	401	4.90E-64

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	20.909
SRR1783600	control	20.891
SRR1783602	moderate drought stress	17.837
SRR1811619	moderate drought stress	17.460

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	12.905
DRR006520	Root Summer glycyrrhizin high producing strain	12.740
DRR006521	Root Winter glycyrrhizin high producing strain	9.851
DRR006522	Root Winter glycyrrhizin high producing strain	9.424
DRR006523	Root Summer glycyrrhizin low producing strain	17.805
DRR006524	Root Summer glycyrrhizin low producing strain	17.599
DRR006525	Leaf Summer glycyrrhizin high producing strain	8.180
DRR006526	Leaf Summer glycyrrhizin high producing strain	8.270

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	21.299
SRR2868004	Drought Stress (root)	20.262
SRR2967015	Control (root)	22.850

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	11.215
SRR9715740	Leaf	12.549
SRR9715741	Leaf	11.891
SRR9715739	Root	4.255
SRR9715742	Root	12.482
SRR9715743	Root	11.799

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	15.374
SRR8749028	MeJA induced 9h	14.236
SRR8749029	MeJA induced 9h	17.074
SRR8749030	Uninduced	12.416
SRR8749031	Uninduced	7.759
SRR8749032	Uninduced	5.857

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	16.230
SRR8400027	Control - Root	16.782