Gene detail information of Glyur000069s00004027 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G54570.1 | 2.00E-163 | Esterase/lipase/thioesterase family protein |
| NR | XP_004494663.1 | 0 | PREDICTED: acyltransferase-like protein At1g54570, chloroplastic-like [Cicer arietinum] |
| COG | YP_004493695.1 | 7.00E-28 | putative acyltransferase [Amycolicicoccus subflavus DQS3-9A1] |
| Swissprot | tr|Q9ZVN2|Y1457_ARATH | 0 | Acyltransferase-like protein At1g54570, chloroplastic (Precursor) |
| trEMBL | tr|G7L0R8|G7L0R8_MEDTR | 0 | Esterase/lipase/thioesterase-like protein {ECO:0000313|EMBL:AES82589.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00069 | 17009 | 23564 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000069s00004027.1 | PF03982.8 | DAGAT | 243 | 324 | 5.40E-08 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 9.662 |
| SRR1783600 | control | 9.902 |
| SRR1783602 | moderate drought stress | 5.806 |
| SRR1811619 | moderate drought stress | 5.660 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.925 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 7.746 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.233 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.189 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 7.559 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 7.803 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 68.506 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 68.177 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 15.893 |
| SRR2868004 | Drought Stress (root) | 12.299 |
| SRR2967015 | Control (root) | 11.721 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 50.883 |
| SRR9715740 | Leaf | 82.552 |
| SRR9715741 | Leaf | 43.171 |
| SRR9715739 | Root | 1.335 |
| SRR9715742 | Root | 5.041 |
| SRR9715743 | Root | 3.907 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 8.515 |
| SRR8749028 | MeJA induced 9h | 6.626 |
| SRR8749029 | MeJA induced 9h | 6.124 |
| SRR8749030 | Uninduced | 2.205 |
| SRR8749031 | Uninduced | 0.972 |
| SRR8749032 | Uninduced | 1.882 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 17.393 |
| SRR8400027 | Control - Root | 19.334 |